Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BATR1942_RS10115 | Genome accession | NC_014639 |
| Coordinates | 2078832..2079869 (-) | Length | 345 a.a. |
| NCBI ID | WP_003325428.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus 1942 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2073832..2084869
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BATR1942_RS10065 (BATR1942_10625) | tasA | 2073989..2074771 (-) | 783 | WP_003325439.1 | biofilm matrix protein TasA | - |
| BATR1942_RS10070 (BATR1942_10630) | sipW | 2074835..2075407 (-) | 573 | WP_010789195.1 | signal peptidase I SipW | - |
| BATR1942_RS10075 (BATR1942_10635) | tapA | 2075391..2076092 (-) | 702 | WP_003325437.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BATR1942_RS10080 (BATR1942_10640) | - | 2076354..2076677 (+) | 324 | WP_003325436.1 | DUF3889 domain-containing protein | - |
| BATR1942_RS10085 (BATR1942_10645) | - | 2076724..2076903 (-) | 180 | WP_003325435.1 | YqzE family protein | - |
| BATR1942_RS10090 (BATR1942_10650) | comGG | 2076973..2077347 (-) | 375 | WP_003325434.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BATR1942_RS10095 (BATR1942_10655) | comGF | 2077348..2077743 (-) | 396 | WP_309484978.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BATR1942_RS10100 (BATR1942_10660) | comGE | 2077757..2078104 (-) | 348 | WP_003325432.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BATR1942_RS10105 (BATR1942_10665) | comGD | 2078088..2078528 (-) | 441 | WP_003325431.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BATR1942_RS10110 (BATR1942_10670) | comGC | 2078518..2078784 (-) | 267 | WP_047937532.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BATR1942_RS10115 (BATR1942_10675) | comGB | 2078832..2079869 (-) | 1038 | WP_003325428.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BATR1942_RS10120 (BATR1942_10680) | comGA | 2079856..2080926 (-) | 1071 | WP_003325427.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BATR1942_RS10125 (BATR1942_10685) | - | 2081343..2082296 (-) | 954 | WP_003325425.1 | magnesium transporter CorA family protein | - |
| BATR1942_RS10130 (BATR1942_10690) | - | 2082418..2083766 (+) | 1349 | Protein_2092 | hemolysin family protein | - |
| BATR1942_RS10135 (BATR1942_10695) | - | 2083833..2084684 (-) | 852 | WP_003325423.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 40126.37 Da Isoelectric Point: 9.7517
>NTDB_id=38778 BATR1942_RS10115 WP_003325428.1 2078832..2079869(-) (comGB) [Bacillus atrophaeus 1942]
MKRIKKSWPINDQANLLNRLGDMTENGYNLLDGLRLMELQMNKRQRTEMSAAVNRLREGEPFYQVLQALAFHKEAVSICY
LAEMHGELSVAMRQSGGLLERKLTQVNQLKKVIRYPIFLIFTVFVMFYILQAVIIPQFSGVYQSMNMETSRTTAVIFAFF
QHVHYAVIGFVLLALGAALYYWFGFKKKSPADKMLFFVRIPILGRLVILFNSYFFSLQLSSLLKSGLSIYDSLKAFKEQS
FLPFYRQEAEQIINKLRAGESIDRALYKHPCYENDFCEVVLHGQLSGQLHRELFTYSQFLMDRLERKVEKWTGILQPVIY
GIVAGMILIVYLSMLLPMYQMMNQL
MKRIKKSWPINDQANLLNRLGDMTENGYNLLDGLRLMELQMNKRQRTEMSAAVNRLREGEPFYQVLQALAFHKEAVSICY
LAEMHGELSVAMRQSGGLLERKLTQVNQLKKVIRYPIFLIFTVFVMFYILQAVIIPQFSGVYQSMNMETSRTTAVIFAFF
QHVHYAVIGFVLLALGAALYYWFGFKKKSPADKMLFFVRIPILGRLVILFNSYFFSLQLSSLLKSGLSIYDSLKAFKEQS
FLPFYRQEAEQIINKLRAGESIDRALYKHPCYENDFCEVVLHGQLSGQLHRELFTYSQFLMDRLERKVEKWTGILQPVIY
GIVAGMILIVYLSMLLPMYQMMNQL
Nucleotide
Download Length: 1038 bp
>NTDB_id=38778 BATR1942_RS10115 WP_003325428.1 2078832..2079869(-) (comGB) [Bacillus atrophaeus 1942]
ATGAAGAGGATTAAAAAAAGCTGGCCGATAAACGATCAAGCTAATTTGCTAAACAGACTCGGTGACATGACAGAAAACGG
ATACAATCTTCTGGATGGATTACGGTTAATGGAACTGCAAATGAATAAGCGTCAGCGTACGGAAATGTCTGCTGCTGTAA
ATCGTTTACGAGAGGGGGAACCATTCTATCAGGTTTTGCAGGCTTTGGCTTTCCACAAGGAAGCCGTAAGCATTTGTTAT
TTAGCAGAAATGCATGGAGAATTGTCCGTTGCTATGAGGCAAAGCGGAGGGCTGTTGGAAAGGAAATTAACACAGGTCAA
TCAGCTGAAAAAAGTCATCCGTTATCCGATTTTCCTGATCTTCACTGTCTTTGTGATGTTTTATATCCTGCAAGCTGTCA
TCATCCCGCAATTTTCAGGAGTTTATCAGTCCATGAATATGGAAACCTCACGCACAACCGCTGTTATATTCGCTTTTTTT
CAGCACGTTCATTATGCAGTGATTGGTTTTGTCTTGCTTGCTCTCGGAGCGGCACTCTATTACTGGTTTGGATTTAAGAA
GAAGTCCCCGGCAGACAAAATGCTCTTTTTTGTACGAATACCCATACTCGGAAGACTTGTCATTTTATTTAACAGCTACT
TTTTTTCTTTGCAGCTCAGCAGCCTATTAAAGTCTGGACTGTCTATTTACGACAGCCTTAAGGCCTTTAAAGAGCAATCG
TTCCTCCCTTTTTACCGTCAGGAGGCAGAACAAATCATTAACAAATTAAGGGCTGGAGAGTCCATAGATAGAGCTCTGTA
TAAACACCCATGCTATGAAAATGACTTTTGTGAAGTGGTGCTGCACGGCCAATTAAGCGGGCAGTTGCATCGTGAACTAT
TCACCTACAGCCAGTTTTTAATGGACCGGCTGGAGCGAAAGGTTGAAAAATGGACGGGAATCCTTCAGCCCGTCATCTAC
GGTATTGTTGCCGGAATGATTTTAATTGTGTATTTGTCGATGCTTTTGCCTATGTATCAGATGATGAATCAATTGTAG
ATGAAGAGGATTAAAAAAAGCTGGCCGATAAACGATCAAGCTAATTTGCTAAACAGACTCGGTGACATGACAGAAAACGG
ATACAATCTTCTGGATGGATTACGGTTAATGGAACTGCAAATGAATAAGCGTCAGCGTACGGAAATGTCTGCTGCTGTAA
ATCGTTTACGAGAGGGGGAACCATTCTATCAGGTTTTGCAGGCTTTGGCTTTCCACAAGGAAGCCGTAAGCATTTGTTAT
TTAGCAGAAATGCATGGAGAATTGTCCGTTGCTATGAGGCAAAGCGGAGGGCTGTTGGAAAGGAAATTAACACAGGTCAA
TCAGCTGAAAAAAGTCATCCGTTATCCGATTTTCCTGATCTTCACTGTCTTTGTGATGTTTTATATCCTGCAAGCTGTCA
TCATCCCGCAATTTTCAGGAGTTTATCAGTCCATGAATATGGAAACCTCACGCACAACCGCTGTTATATTCGCTTTTTTT
CAGCACGTTCATTATGCAGTGATTGGTTTTGTCTTGCTTGCTCTCGGAGCGGCACTCTATTACTGGTTTGGATTTAAGAA
GAAGTCCCCGGCAGACAAAATGCTCTTTTTTGTACGAATACCCATACTCGGAAGACTTGTCATTTTATTTAACAGCTACT
TTTTTTCTTTGCAGCTCAGCAGCCTATTAAAGTCTGGACTGTCTATTTACGACAGCCTTAAGGCCTTTAAAGAGCAATCG
TTCCTCCCTTTTTACCGTCAGGAGGCAGAACAAATCATTAACAAATTAAGGGCTGGAGAGTCCATAGATAGAGCTCTGTA
TAAACACCCATGCTATGAAAATGACTTTTGTGAAGTGGTGCTGCACGGCCAATTAAGCGGGCAGTTGCATCGTGAACTAT
TCACCTACAGCCAGTTTTTAATGGACCGGCTGGAGCGAAAGGTTGAAAAATGGACGGGAATCCTTCAGCCCGTCATCTAC
GGTATTGTTGCCGGAATGATTTTAATTGTGTATTTGTCGATGCTTTTGCCTATGTATCAGATGATGAATCAATTGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
69.04 |
93.623 |
0.646 |