Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FZN58_RS06680 Genome accession   NZ_CP043763
Coordinates   1296584..1297552 (+) Length   322 a.a.
NCBI ID   WP_057033756.1    Uniprot ID   -
Organism   Campylobacter jejuni strain BfR-CA-14430     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1291584..1302552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZN58_RS06655 (FZN58_06655) cdsA 1292494..1293219 (-) 726 WP_057033757.1 phosphatidate cytidylyltransferase -
  FZN58_RS06660 (FZN58_06660) - 1293228..1293566 (-) 339 WP_002852397.1 hypothetical protein -
  FZN58_RS06665 (FZN58_06665) - 1293568..1294875 (-) 1308 WP_002864240.1 NFACT family protein -
  FZN58_RS06670 (FZN58_06670) mobA 1294937..1295512 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  FZN58_RS06675 (FZN58_06675) pldA 1295509..1296498 (+) 990 WP_032590534.1 phospholipase A -
  FZN58_RS06680 (FZN58_06680) ceuB 1296584..1297552 (+) 969 WP_057033756.1 ABC transporter permease Machinery gene
  FZN58_RS06685 (FZN58_06685) ceuC 1297545..1298483 (+) 939 WP_139863883.1 iron chelate uptake ABC transporter family permease subunit -
  FZN58_RS06690 (FZN58_06690) ceuD 1298480..1299235 (+) 756 WP_057033755.1 ABC transporter ATP-binding protein -
  FZN58_RS06695 (FZN58_06695) ceuB 1299248..1300240 (+) 993 WP_149831550.1 enterochelin ABC transporter substrate-binding protein CeuB -
  FZN58_RS06705 (FZN58_06705) - 1300466..1301020 (-) 555 WP_002871963.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35431.31 Da        Isoelectric Point: 9.6678

>NTDB_id=385752 FZN58_RS06680 WP_057033756.1 1296584..1297552(+) (ceuB) [Campylobacter jejuni strain BfR-CA-14430]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFAFLGSFVFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=385752 FZN58_RS06680 WP_057033756.1 1296584..1297552(+) (ceuB) [Campylobacter jejuni strain BfR-CA-14430]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAGCTATCATTGCTTCTATATTTGCATTTTTGGGTTCTTTTGTATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTGCTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment