Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FRD49_RS01725 | Genome accession | NZ_CP042994 |
| Coordinates | 366553..367014 (+) | Length | 153 a.a. |
| NCBI ID | WP_031982113.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain J1A | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 361553..372014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRD49_RS01705 (FRD49_01705) | - | 362942..363829 (+) | 888 | WP_032011719.1 | metal-dependent hydrolase | - |
| FRD49_RS01710 (FRD49_01710) | - | 363965..364555 (+) | 591 | WP_002051712.1 | LemA family protein | - |
| FRD49_RS01715 (FRD49_01715) | - | 364577..365659 (+) | 1083 | WP_148356608.1 | TPM domain-containing protein | - |
| FRD49_RS01720 (FRD49_01720) | - | 365653..366213 (+) | 561 | WP_148356609.1 | TPM domain-containing protein | - |
| FRD49_RS01725 (FRD49_01725) | pilA | 366553..367014 (+) | 462 | WP_031982113.1 | pilin | Machinery gene |
| FRD49_RS01730 (FRD49_01730) | - | 367071..368381 (+) | 1311 | WP_148356610.1 | O-antigen ligase family protein | - |
| FRD49_RS01735 (FRD49_01735) | - | 368481..370109 (+) | 1629 | WP_148356611.1 | PglL family O-oligosaccharyltransferase | - |
| FRD49_RS01740 (FRD49_01740) | bfr | 370150..370614 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| FRD49_RS01745 (FRD49_01745) | - | 370859..371053 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| FRD49_RS01750 (FRD49_01750) | - | 371273..371656 (-) | 384 | WP_002051728.1 | RidA family protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15462.61 Da Isoelectric Point: 7.7741
>NTDB_id=380031 FRD49_RS01725 WP_031982113.1 366553..367014(+) (pilA) [Acinetobacter nosocomialis strain J1A]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIAKSQASEAMTIADGLKTNIQTNLQSNSCFSGGATSAVAGTDTVSGK
YGSATITTISGTAAANNLVCGITYTFKTTGVSSKIAAKVLALQTNDNGVLSKAASGTTIDDKYLPNSLTVAGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIAKSQASEAMTIADGLKTNIQTNLQSNSCFSGGATSAVAGTDTVSGK
YGSATITTISGTAAANNLVCGITYTFKTTGVSSKIAAKVLALQTNDNGVLSKAASGTTIDDKYLPNSLTVAGS
Nucleotide
Download Length: 462 bp
>NTDB_id=380031 FRD49_RS01725 WP_031982113.1 366553..367014(+) (pilA) [Acinetobacter nosocomialis strain J1A]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAGGATTATATTGCTAAATCTCAAGCTTCTGAAGCAATGACTATTGCTGATGGTTTGAAAACGAATATTC
AAACTAATCTTCAAAGCAATTCTTGCTTTTCTGGTGGTGCGACATCTGCTGTCGCTGGAACAGATACTGTATCAGGTAAA
TATGGTAGTGCCACTATCACAACTATAAGTGGCACTGCTGCTGCAAATAACCTCGTATGCGGTATCACTTATACATTTAA
AACGACTGGTGTTTCAAGTAAAATTGCTGCTAAAGTTCTTGCATTACAAACTAACGATAATGGTGTTTTAAGCAAAGCAG
CTTCTGGTACAACTATTGATGATAAATATTTACCTAATTCATTAACTGTTGCAGGTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTTGTAGCGATTATTGGTATTTTGGCAGCGATCGCGAT
TCCTGCTTATCAGGATTATATTGCTAAATCTCAAGCTTCTGAAGCAATGACTATTGCTGATGGTTTGAAAACGAATATTC
AAACTAATCTTCAAAGCAATTCTTGCTTTTCTGGTGGTGCGACATCTGCTGTCGCTGGAACAGATACTGTATCAGGTAAA
TATGGTAGTGCCACTATCACAACTATAAGTGGCACTGCTGCTGCAAATAACCTCGTATGCGGTATCACTTATACATTTAA
AACGACTGGTGTTTCAAGTAAAATTGCTGCTAAAGTTCTTGCATTACAAACTAACGATAATGGTGTTTTAAGCAAAGCAG
CTTCTGGTACAACTATTGATGATAAATATTTACCTAATTCATTAACTGTTGCAGGTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
60.811 |
96.732 |
0.588 |
| comP | Acinetobacter baylyi ADP1 |
41.29 |
100 |
0.418 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
37.576 |
100 |
0.405 |
| pilE | Neisseria gonorrhoeae MS11 |
37.423 |
100 |
0.399 |
| pilA | Pseudomonas aeruginosa PAK |
39.189 |
96.732 |
0.379 |
| pilA | Acinetobacter baumannii strain A118 |
37.419 |
100 |
0.379 |
| pilA2 | Legionella pneumophila str. Paris |
39.583 |
94.118 |
0.373 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
38.889 |
94.118 |
0.366 |