Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FNL97_RS11365 Genome accession   NZ_CP041632
Coordinates   2221976..2223226 (-) Length   416 a.a.
NCBI ID   WP_062678187.1    Uniprot ID   A0A6G9J368
Organism   Geobacillus sp. E263     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2216976..2228226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL97_RS11350 recA 2217971..2218795 (-) 825 WP_223812267.1 recombinase RecA Machinery gene
  FNL97_RS11355 ltrA 2218866..2220683 (-) 1818 WP_143415828.1 group II intron reverse transcriptase/maturase -
  FNL97_RS11360 - 2221525..2221812 (-) 288 Protein_2247 DNA recombination/repair protein RecA -
  FNL97_RS11365 cinA 2221976..2223226 (-) 1251 WP_062678187.1 competence/damage-inducible protein A Machinery gene
  FNL97_RS11370 pgsA 2223263..2223841 (-) 579 WP_015863518.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FNL97_RS11375 - 2223898..2224782 (-) 885 WP_081188547.1 helix-turn-helix domain-containing protein -
  FNL97_RS11380 - 2224807..2225598 (-) 792 WP_015863516.1 DUF3388 domain-containing protein -
  FNL97_RS11385 - 2225731..2225979 (-) 249 WP_062678189.1 DUF3243 domain-containing protein -
  FNL97_RS11390 - 2226041..2226757 (-) 717 WP_015863514.1 SDR family oxidoreductase -
  FNL97_RS11395 - 2226798..2228090 (-) 1293 WP_015863513.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45397.32 Da        Isoelectric Point: 6.1923

>NTDB_id=372627 FNL97_RS11365 WP_062678187.1 2221976..2223226(-) (cinA) [Geobacillus sp. E263]
MNAEIIAVGSELLLGQIANTNAQFLSEKLAELGINVYFHTVVGDNAGRLEQAVRVAQARAELIIFTGGLGPTKDDLTKET
IARLLGRELVIDEEALRSIEAYFARTNRTMTENNKKQALVLQGSTILKNEHGMAPGMAITLNSITYMLLPGPPKEMQPMF
LKYGRPFLMEQLGRHERIESRVLRFFGIGESQLETDIEDLIDQQSNPTIAPLAGDGEVALRLTAKHHSEIEAKKLLDKTE
QAILERVGRYFYGYNDETLFKKTVKMLKEKKKTIAAAESLTGGLFLTELTAIPGASQVVRGGVVCYANEVKEKVLHVPAS
VLTTDGAVSERCAQLLAENVRTLCHADIGISFTGVAGPDPLEGKPVGTVYIGISTPENETEVYALALPGQRDAIRIRTAK
YGCSIILKKLAAAYEG

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=372627 FNL97_RS11365 WP_062678187.1 2221976..2223226(-) (cinA) [Geobacillus sp. E263]
TTGAATGCGGAGATTATTGCTGTCGGCTCTGAGTTATTGCTTGGGCAGATTGCCAACACGAATGCACAGTTTTTATCTGA
AAAGCTCGCTGAACTTGGAATCAATGTCTATTTTCATACCGTTGTAGGCGACAATGCCGGCCGGCTCGAACAGGCGGTAA
GAGTGGCGCAGGCGCGTGCCGAACTCATTATTTTTACTGGCGGGCTTGGGCCGACGAAAGATGATTTAACGAAAGAAACG
ATCGCCCGCCTGTTAGGGCGCGAGCTTGTGATCGATGAGGAAGCGCTTCGTTCCATTGAAGCATATTTTGCCCGCACAAA
CCGGACCATGACAGAAAATAATAAAAAACAGGCGCTTGTATTACAAGGATCTACTATATTGAAAAACGAACACGGAATGG
CACCTGGAATGGCAATTACGCTGAATTCAATTACGTATATGCTTCTTCCCGGCCCTCCAAAAGAAATGCAGCCGATGTTT
CTCAAATATGGCCGACCGTTTTTAATGGAACAGCTTGGCCGTCATGAGCGCATTGAATCGCGTGTATTACGCTTTTTCGG
AATCGGTGAGTCGCAGCTGGAAACAGACATTGAAGATCTTATTGATCAACAATCAAACCCGACGATTGCTCCGCTTGCTG
GTGACGGAGAAGTAGCGTTGCGCTTGACCGCGAAACACCATTCCGAAATCGAAGCAAAAAAACTTTTAGATAAAACGGAA
CAAGCGATTTTAGAGCGCGTCGGCCGCTATTTTTATGGCTATAATGACGAAACGTTGTTTAAAAAGACCGTGAAGATGTT
GAAGGAAAAAAAGAAAACGATCGCGGCGGCAGAAAGCCTCACAGGCGGACTTTTCTTAACCGAATTAACGGCCATTCCCG
GCGCTTCTCAAGTTGTCCGCGGCGGAGTTGTCTGCTATGCCAATGAAGTAAAAGAGAAAGTTCTTCACGTTCCTGCTTCT
GTTTTGACAACAGATGGAGCAGTAAGCGAACGTTGTGCGCAGCTATTAGCGGAAAATGTCCGCACACTTTGTCATGCTGA
TATTGGCATCAGTTTTACAGGCGTAGCAGGACCAGACCCGCTTGAAGGAAAGCCAGTCGGCACTGTATATATTGGCATTT
CCACCCCTGAAAACGAGACAGAAGTCTATGCCCTTGCATTACCCGGTCAGCGTGATGCGATTCGAATTCGTACCGCGAAA
TATGGTTGCTCCATTATATTAAAAAAATTGGCGGCTGCATATGAAGGGTAG

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Competence-damaged protein (CinA)

(257-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G9J368

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

61.275

98.077

0.601
  cinA Streptococcus mitis SK321

48.333

100

0.488
  cinA Streptococcus mitis NCTC 12261

48.095

100

0.486
  cinA Streptococcus pneumoniae TIGR4

47.857

100

0.483
  cinA Streptococcus pneumoniae Rx1

47.857

100

0.483
  cinA Streptococcus pneumoniae R6

47.857

100

0.483
  cinA Streptococcus pneumoniae D39

47.619

100

0.481
  cinA Streptococcus mutans UA159

47.101

99.519

0.469
  cinA Streptococcus suis isolate S10

43.947

91.346

0.401

Multiple sequence alignment