Detailed information NTG0366968

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: FED49_RS16610
• Genome accession: NZ_CP040747
• Coordinates: 3173942..3174628 (-)
• Length: 228 a.a.
• NCBI ID: WP_171971360.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain HQ-51-Ba
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3168942..3179628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FED49_RS16575	fliW	3169078..3169512 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
FED49_RS16580	-	3169541..3170119 (-)	579	WP_138826532.1	DUF6470 family protein	-
FED49_RS16585	flgL	3170166..3171077 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
FED49_RS16590	flgK	3171086..3172606 (-)	1521	WP_138826534.1	flagellar hook-associated protein FlgK	-
FED49_RS16595	-	3172622..3173104 (-)	483	WP_007499977.1	flagellar protein FlgN	-
FED49_RS16600	flgM	3173123..3173386 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
FED49_RS16605	-	3173466..3173885 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
FED49_RS16610	comFC	3173942..3174628 (-)	687	WP_171971360.1	ComF family protein	Machinery gene
FED49_RS16615	-	3174625..3174918 (-)	294	WP_017357862.1	late competence development ComFB family protein	-
FED49_RS16620	comFA	3174983..3176362 (-)	1380	WP_138826871.1	DEAD/DEAH box helicase	Machinery gene
FED49_RS16625	-	3176482..3177324 (-)	843	WP_138826536.1	DegV family protein	-
FED49_RS16630	degU	3177536..3178225 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
FED49_RS16635	degS	3178290..3179465 (-)	1176	WP_008360205.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26177.80 Da
• Isoelectric Point: 10.3820

>NTDB_id=366968 FED49_RS16610 WP_171971360.1 3173942..3174628(-) (comFC) [Bacillus altitudinis strain HQ-51-Ba]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCHDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDVLARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QRKQSKKRKNERLHQQKLFQLRQANPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=366968 FED49_RS16610 WP_171971360.1 3173942..3174628(-) (comFC) [Bacillus altitudinis strain HQ-51-Ba]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTCATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCATGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATGTTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGGAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAAGTTGTTTCAATTAAGGCAGGCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (165-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373