Detailed information NTG0366971

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FED49_RS16635
• Genome accession: NZ_CP040747
• Coordinates: 3178290..3179465 (-)
• Length: 391 a.a.
• NCBI ID: WP_008360205.1
• Uniprot ID: A0AAC9NCV1
• Organism: Bacillus altitudinis strain HQ-51-Ba
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3173290..3184465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FED49_RS16605	-	3173466..3173885 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
FED49_RS16610	comFC	3173942..3174628 (-)	687	WP_171971360.1	ComF family protein	Machinery gene
FED49_RS16615	-	3174625..3174918 (-)	294	WP_017357862.1	late competence development ComFB family protein	-
FED49_RS16620	comFA	3174983..3176362 (-)	1380	WP_138826871.1	DEAD/DEAH box helicase	Machinery gene
FED49_RS16625	-	3176482..3177324 (-)	843	WP_138826536.1	DegV family protein	-
FED49_RS16630	degU	3177536..3178225 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
FED49_RS16635	degS	3178290..3179465 (-)	1176	WP_008360205.1	sensor histidine kinase	Regulator
FED49_RS16640	-	3179687..3180355 (+)	669	WP_017357860.1	YigZ family protein	-
FED49_RS16645	-	3180340..3181437 (+)	1098	WP_007499958.1	LCP family protein	-
FED49_RS16650	-	3181475..3182542 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
FED49_RS16655	tuaH	3182677..3183924 (-)	1248	WP_138826539.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=366971 FED49_RS16635 WP_008360205.1 3178290..3179465(-) (degS) [Bacillus altitudinis strain HQ-51-Ba]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=366971 FED49_RS16635 WP_008360205.1 3178290..3179465(-) (degS) [Bacillus altitudinis strain HQ-51-Ba]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTGGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTGCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAGCTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGGCAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTTCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.714	98.465	0.844