Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BCPR1_RS09285 Genome accession   NZ_CP040515
Coordinates   1745741..1746979 (+) Length   412 a.a.
NCBI ID   WP_000990725.1    Uniprot ID   A0AAJ1KCR9
Organism   Bacillus paranthracis strain PR1     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1740741..1751979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCPR1_RS09255 (BCPR1_09255) - 1740793..1742079 (+) 1287 WP_070806753.1 pitrilysin family protein -
  BCPR1_RS09260 (BCPR1_09260) - 1742183..1742896 (+) 714 WP_000759611.1 SDR family oxidoreductase -
  BCPR1_RS09265 (BCPR1_09265) - 1742972..1743220 (+) 249 WP_000114454.1 DUF3243 domain-containing protein -
  BCPR1_RS09270 (BCPR1_09270) - 1743360..1744145 (+) 786 WP_000574107.1 DUF3388 domain-containing protein -
  BCPR1_RS09275 (BCPR1_09275) - 1744167..1745078 (+) 912 WP_044791590.1 helix-turn-helix domain-containing protein -
  BCPR1_RS09280 (BCPR1_09280) pgsA 1745142..1745720 (+) 579 WP_001052964.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BCPR1_RS09285 (BCPR1_09285) cinA 1745741..1746979 (+) 1239 WP_000990725.1 competence/damage-inducible protein CinA Machinery gene
  BCPR1_RS09290 (BCPR1_09290) recA 1747123..1747731 (+) 609 Protein_1804 recombinase RecA -
  BCPR1_RS09295 (BCPR1_09295) - 1748058..1748480 (+) 423 Protein_1805 recombinase RecA -
  BCPR1_RS09300 (BCPR1_09300) rny 1748966..1750528 (+) 1563 WP_000099774.1 ribonuclease Y -
  BCPR1_RS09305 (BCPR1_09305) - 1750693..1751487 (+) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  BCPR1_RS09310 (BCPR1_09310) spoVS 1751636..1751896 (+) 261 WP_000404341.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45462.70 Da        Isoelectric Point: 5.1095

>NTDB_id=364871 BCPR1_RS09285 WP_000990725.1 1745741..1746979(+) (cinA) [Bacillus paranthracis strain PR1]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLGEELVYDENALALISNYFKRTGREFTENNKKQALVLNGANVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNAHEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LFTDGAVSKECARYLAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=364871 BCPR1_RS09285 WP_000990725.1 1745741..1746979(+) (cinA) [Bacillus paranthracis strain PR1]
ATGAACGCTGAAATCATTGCGGTTGGAACAGAATTATTACTTGGACAAATTGCAAATACGAACGCCCAGTTTTTGTCTGA
AAAGTTAGCTTCAATTGGAATTAACGTGTACTACCATACTGTAGTTGGTGATAATAACAAGCGACTGCAGCAGGCGATTG
AAGTTGCAGAGGAACGTGCGGATATGCTCATTTTCACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAGGAAACA
ATTGCGTCTAGCTTAGGGGAAGAGCTTGTATATGACGAAAATGCATTAGCATTAATAAGCAATTATTTTAAGCGTACAGG
TCGTGAGTTCACTGAAAATAATAAAAAGCAGGCACTCGTTTTGAATGGAGCAAATGTGTTTGCAAATGATCACGGTATGG
CACCTGGTATGGGATTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAACCAATGTAT
GTAAGTTATGTGGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGCGTGCTTCGCTTTTTCGGAAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACGAATCCGACCATTGCCCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAACATCAAAATGCTCATGAAGCGGAGAAACTCATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCATTATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTGACTTTAGCGTGTGCGGAAAGTTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGCGGTGTCATTTGTTATCATAATGACGTAAAGCAGCATGTTTTACATGTACCTGAGGAAGTG
TTGTTTACTGACGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAAGAATTATTAGAAGCGGATAT
CGGGATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAACCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGCCAACAAATTAGAGAACGCTCAGCGAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAAATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.738

100

0.587
  cinA Streptococcus mitis SK321

47.255

100

0.481
  cinA Streptococcus pneumoniae TIGR4

47.255

100

0.481
  cinA Streptococcus pneumoniae Rx1

46.778

100

0.476
  cinA Streptococcus pneumoniae R6

46.778

100

0.476
  cinA Streptococcus pneumoniae D39

46.539

100

0.473
  cinA Streptococcus mitis NCTC 12261

46.539

100

0.473
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

41.534

91.748

0.381

Multiple sequence alignment