Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E3S92_RS09905 Genome accession   NZ_CP047833
Coordinates   2001538..2002338 (-) Length   266 a.a.
NCBI ID   WP_156974694.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_926     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1996538..2007338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S92_RS09895 (E3S92_09895) rlmH 1998163..1998642 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E3S92_RS09900 (E3S92_09900) adsA 1999010..2001310 (-) 2301 WP_000645776.1 LPXTG-anchored adenosine synthase AdsA -
  E3S92_RS09905 (E3S92_09905) vicX 2001538..2002338 (-) 801 WP_156974694.1 MBL fold metallo-hydrolase Regulator
  E3S92_RS09910 (E3S92_09910) - 2002726..2003514 (-) 789 WP_001104170.1 two-component system regulatory protein YycI -
  E3S92_RS09915 (E3S92_09915) yycH 2003515..2004849 (-) 1335 WP_001060151.1 two-component system activity regulator YycH -
  E3S92_RS09920 (E3S92_09920) walK 2004842..2006668 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30295.48 Da        Isoelectric Point: 6.3392

>NTDB_id=364641 E3S92_RS09905 WP_156974694.1 2001538..2002338(-) (vicX) [Staphylococcus aureus strain UP_926]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAITDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=364641 E3S92_RS09905 WP_156974694.1 2001538..2002338(-) (vicX) [Staphylococcus aureus strain UP_926]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCATTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGCATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATAACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACACCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47

Multiple sequence alignment