Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | FEO85_RS17010 | Genome accession | NZ_CP040431 |
| Coordinates | 3660538..3660945 (-) | Length | 135 a.a. |
| NCBI ID | WP_154329696.1 | Uniprot ID | - |
| Organism | Stenotrophomonas maltophilia strain sm454 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3655538..3665945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FEO85_RS17000 (FEO85_17165) | pilR | 3657081..3658454 (+) | 1374 | WP_005410795.1 | sigma-54 dependent transcriptional regulator | Regulator |
| FEO85_RS17005 (FEO85_17170) | pilB | 3658581..3660314 (-) | 1734 | WP_005414305.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| FEO85_RS17010 (FEO85_17175) | pilA/pilAI | 3660538..3660945 (-) | 408 | WP_154329696.1 | pilin | Machinery gene |
| FEO85_RS17015 (FEO85_17180) | - | 3661098..3661535 (-) | 438 | WP_043035129.1 | pilin | - |
| FEO85_RS17020 (FEO85_17185) | pilC | 3661888..3663147 (+) | 1260 | WP_154329584.1 | type II secretion system F family protein | Machinery gene |
| FEO85_RS17025 (FEO85_17190) | - | 3663155..3664018 (+) | 864 | WP_005410800.1 | A24 family peptidase | - |
| FEO85_RS17030 (FEO85_17195) | coaE | 3664030..3664641 (+) | 612 | WP_049452340.1 | dephospho-CoA kinase | - |
| FEO85_RS17035 (FEO85_17200) | - | 3664706..3665017 (-) | 312 | Protein_3340 | hypothetical protein | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 14340.51 Da Isoelectric Point: 5.5999
>NTDB_id=364363 FEO85_RS17010 WP_154329696.1 3660538..3660945(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain sm454]
MNTQKGFTLIELMIVVAIIGILAAIATVAFQPYIIRTQLTAALADISPGKMLVETVVYENRSASLITPEFIGGAQNAHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
MNTQKGFTLIELMIVVAIIGILAAIATVAFQPYIIRTQLTAALADISPGKMLVETVVYENRSASLITPEFIGGAQNAHCS
NVEAELSDSGVGHISCTLKGHSALDGKDLILRRSAEGIWSCDGSAFEARYRPTGC
Nucleotide
Download Length: 408 bp
>NTDB_id=364363 FEO85_RS17010 WP_154329696.1 3660538..3660945(-) (pilA/pilAI) [Stenotrophomonas maltophilia strain sm454]
ATGAACACGCAGAAGGGCTTTACGCTCATCGAGCTGATGATCGTGGTGGCCATCATCGGCATTCTGGCGGCCATCGCGAC
GGTGGCGTTCCAGCCTTACATCATCCGTACTCAGCTGACGGCCGCGCTGGCCGACATCAGCCCGGGCAAGATGCTGGTTG
AAACGGTCGTCTATGAAAACCGCTCGGCCAGCCTGATCACCCCCGAGTTCATCGGTGGCGCCCAGAACGCCCACTGCTCC
AACGTCGAAGCCGAACTCAGCGATTCCGGCGTCGGCCATATCAGCTGCACCTTGAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
ATGAACACGCAGAAGGGCTTTACGCTCATCGAGCTGATGATCGTGGTGGCCATCATCGGCATTCTGGCGGCCATCGCGAC
GGTGGCGTTCCAGCCTTACATCATCCGTACTCAGCTGACGGCCGCGCTGGCCGACATCAGCCCGGGCAAGATGCTGGTTG
AAACGGTCGTCTATGAAAACCGCTCGGCCAGCCTGATCACCCCCGAGTTCATCGGTGGCGCCCAGAACGCCCACTGCTCC
AACGTCGAAGCCGAACTCAGCGATTCCGGCGTCGGCCATATCAGCTGCACCTTGAAGGGACACAGCGCGCTGGACGGCAA
GGACCTGATCCTGCGCCGCTCCGCCGAGGGCATCTGGAGCTGCGATGGCAGCGCGTTCGAAGCGCGCTATCGCCCGACCG
GCTGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
48.529 |
100 |
0.489 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
41.912 |
100 |
0.422 |
| pilA | Acinetobacter baumannii strain A118 |
41.606 |
100 |
0.422 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.304 |
100 |
0.422 |
| pilA | Pseudomonas aeruginosa PAK |
37.748 |
100 |
0.422 |
| pilA2 | Legionella pneumophila str. Paris |
40.299 |
99.259 |
0.4 |
| comP | Acinetobacter baylyi ADP1 |
35.333 |
100 |
0.393 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.594 |
98.519 |
0.37 |