Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | GSF12_RS03035 | Genome accession | NZ_CP047226 |
| Coordinates | 653740..654273 (+) | Length | 177 a.a. |
| NCBI ID | WP_159374325.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain YV1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 648740..659273
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSF12_RS03010 (GSF12_03010) | - | 650240..650740 (-) | 501 | WP_159374277.1 | IS630 family transposase | - |
| GSF12_RS03015 (GSF12_03015) | - | 650773..651153 (-) | 381 | WP_159374322.1 | helix-turn-helix domain-containing protein | - |
| GSF12_RS03020 (GSF12_03020) | pilM | 651266..652318 (+) | 1053 | WP_159374323.1 | pilus assembly protein PilM | Machinery gene |
| GSF12_RS03025 (GSF12_03025) | pilN | 652318..652989 (+) | 672 | WP_159374324.1 | PilN domain-containing protein | Machinery gene |
| GSF12_RS03030 (GSF12_03030) | comO/pilO | 652992..653753 (+) | 762 | WP_201450424.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GSF12_RS03035 (GSF12_03035) | comL/pilP | 653740..654273 (+) | 534 | WP_159374325.1 | pilus assembly protein PilP | Machinery gene |
| GSF12_RS03040 (GSF12_03040) | comQ/pilQ | 654291..656624 (+) | 2334 | WP_159374326.1 | type IV pilus secretin family protein | Machinery gene |
| GSF12_RS03045 (GSF12_03045) | - | 656733..657269 (+) | 537 | WP_159374327.1 | shikimate kinase | - |
| GSF12_RS03050 (GSF12_03050) | aroB | 657338..658435 (+) | 1098 | WP_159374328.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 19392.36 Da Isoelectric Point: 5.2600
>NTDB_id=358158 GSF12_RS03035 WP_159374325.1 653740..654273(+) (comL/pilP) [Moraxella osloensis strain YV1]
MAINKKPLTICLALLALLSGCTDRVGLAEQQMQEIRNQPAQPVKPPPTPEVVQEFNYSASQLRSPFMPPSLMLQANQVQQ
MQGVRPDVTRLKEPLEQFELNELTYKGTMVSSSGEVYGLVQRPDGGIASVKVGNYMGKNDGRIAEITPTQINLIEIIPDS
RVGYVEKPNSIVAAVSQ
MAINKKPLTICLALLALLSGCTDRVGLAEQQMQEIRNQPAQPVKPPPTPEVVQEFNYSASQLRSPFMPPSLMLQANQVQQ
MQGVRPDVTRLKEPLEQFELNELTYKGTMVSSSGEVYGLVQRPDGGIASVKVGNYMGKNDGRIAEITPTQINLIEIIPDS
RVGYVEKPNSIVAAVSQ
Nucleotide
Download Length: 534 bp
>NTDB_id=358158 GSF12_RS03035 WP_159374325.1 653740..654273(+) (comL/pilP) [Moraxella osloensis strain YV1]
ATGGCAATAAATAAAAAACCGCTCACTATTTGCTTAGCGCTATTAGCCCTCTTATCTGGCTGTACTGACCGTGTCGGTTT
GGCAGAGCAACAAATGCAGGAAATCCGTAACCAGCCCGCGCAACCGGTAAAGCCACCACCGACACCTGAAGTGGTACAAG
AGTTTAATTACAGCGCTTCACAGCTGCGTAGCCCATTTATGCCGCCAAGTTTAATGCTGCAAGCCAATCAAGTACAGCAA
ATGCAAGGGGTCAGACCGGATGTGACCCGACTCAAAGAGCCGCTTGAGCAATTTGAGTTGAATGAGCTTACCTATAAAGG
TACGATGGTGTCATCATCTGGCGAGGTATATGGTCTTGTTCAACGCCCAGATGGGGGCATTGCCAGTGTCAAAGTGGGTA
ATTATATGGGTAAAAATGATGGGCGTATTGCAGAGATTACGCCAACCCAAATTAACTTAATTGAAATCATACCAGACAGT
CGTGTCGGCTATGTCGAAAAACCAAACTCAATTGTTGCCGCAGTTAGTCAATAA
ATGGCAATAAATAAAAAACCGCTCACTATTTGCTTAGCGCTATTAGCCCTCTTATCTGGCTGTACTGACCGTGTCGGTTT
GGCAGAGCAACAAATGCAGGAAATCCGTAACCAGCCCGCGCAACCGGTAAAGCCACCACCGACACCTGAAGTGGTACAAG
AGTTTAATTACAGCGCTTCACAGCTGCGTAGCCCATTTATGCCGCCAAGTTTAATGCTGCAAGCCAATCAAGTACAGCAA
ATGCAAGGGGTCAGACCGGATGTGACCCGACTCAAAGAGCCGCTTGAGCAATTTGAGTTGAATGAGCTTACCTATAAAGG
TACGATGGTGTCATCATCTGGCGAGGTATATGGTCTTGTTCAACGCCCAGATGGGGGCATTGCCAGTGTCAAAGTGGGTA
ATTATATGGGTAAAAATGATGGGCGTATTGCAGAGATTACGCCAACCCAAATTAACTTAATTGAAATCATACCAGACAGT
CGTGTCGGCTATGTCGAAAAACCAAACTCAATTGTTGCCGCAGTTAGTCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
47.674 |
97.175 |
0.463 |
| pilP | Acinetobacter baumannii D1279779 |
46.746 |
95.48 |
0.446 |