Detailed information NTG0358159

Bioinformatically predicted

Overview

• Name: comQ/pilQ
• Type: Machinery gene
• Locus tag: GSF12_RS03040
• Genome accession: NZ_CP047226
• Coordinates: 654291..656624 (+)
• Length: 777 a.a.
• NCBI ID: WP_159374326.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain YV1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 649291..661624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSF12_RS03010 (GSF12_03010)	-	650240..650740 (-)	501	WP_159374277.1	IS630 family transposase	-
GSF12_RS03015 (GSF12_03015)	-	650773..651153 (-)	381	WP_159374322.1	helix-turn-helix domain-containing protein	-
GSF12_RS03020 (GSF12_03020)	pilM	651266..652318 (+)	1053	WP_159374323.1	pilus assembly protein PilM	Machinery gene
GSF12_RS03025 (GSF12_03025)	pilN	652318..652989 (+)	672	WP_159374324.1	PilN domain-containing protein	Machinery gene
GSF12_RS03030 (GSF12_03030)	comO/pilO	652992..653753 (+)	762	WP_201450424.1	type 4a pilus biogenesis protein PilO	Machinery gene
GSF12_RS03035 (GSF12_03035)	comL/pilP	653740..654273 (+)	534	WP_159374325.1	pilus assembly protein PilP	Machinery gene
GSF12_RS03040 (GSF12_03040)	comQ/pilQ	654291..656624 (+)	2334	WP_159374326.1	type IV pilus secretin family protein	Machinery gene
GSF12_RS03045 (GSF12_03045)	-	656733..657269 (+)	537	WP_159374327.1	shikimate kinase	-
GSF12_RS03050 (GSF12_03050)	aroB	657338..658435 (+)	1098	WP_159374328.1	3-dehydroquinate synthase	-
GSF12_RS03055 (GSF12_03055)	-	658505..659488 (+)	984	WP_201450425.1	hypothetical protein	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 83073.44 Da
• Isoelectric Point: 5.7525

>NTDB_id=358159 GSF12_RS03040 WP_159374326.1 654291..656624(+) (comQ/pilQ) [Moraxella osloensis strain YV1]
MNFNAYPFRTSTSKLAVAMSAMLVSSSVFAADTIRNISVTTPSAMLTELNIDFANSAVTPTAYELASPTRLVLDFPNVNN
QISSRMQTYNQGYVNNVTTLTNDSMTRMIIELSNQATYSTRVVNNRLVVSMQPKGSTSAVTTVATNPAIVTPVVTSPVVV
SQPAVVVTEPAPVIVTPPPVVVQTPPPVAVVTQTTKAAPPANTMVVKVNPLLNPAAAVVQQYNYDGLAAINFNGTSNGGG
NISVNLVNDSIPVDVQRMGDELVIRLTGATIPSRLQKQMTVGNGLVRDVIATNQGRNGVIRIAMTGDYDYKAFQTGNQLN
INIDPPKRLREPTIEERTYSGAPLSLEFQDVSVRTILEVLAQHTNTNIVASDSVSGNITLRLINVPWDQALDIILKSKNL
DKRVNGNVIWVAPAAELAKQESDELKAQQEKKVLDPLRTEYIRLNYAKAENVRTLIEAGRATSDRSSGNTSLLTDRGTVT
IDTRTNTLIVKDTAETISNIRDLISKIDIAVKQVMIEARIVSATDTFSKELGVKWGILSQGAASNRNLLVGGNLSTIDSL
KTYTTATNADGTTYPVYSGLTAANNLSVNLGAANPAGSIAFGLLSISDLLLDLELSAMQADNKGEVISSPKVLTADKQTA
KIMSGTQIPYQEASASGATSTSFIEAALSLEVTPNITPEGRIGMDLSIENGSPTIINGATAVSKDSIKTNVVVDDGQTVV
LGGVFKNTLGNDVTKIPFLGDLPYVDRFFKRTSKSNNKQELLIFVTPKLVNDTGRIN

Nucleotide

• Length: 2334 bp

>NTDB_id=358159 GSF12_RS03040 WP_159374326.1 654291..656624(+) (comQ/pilQ) [Moraxella osloensis strain YV1]
ATGAATTTTAATGCCTATCCATTTCGAACTTCAACGTCTAAGCTAGCGGTAGCGATGAGTGCGATGTTAGTATCTAGCAG
CGTGTTTGCAGCTGATACGATTAGAAATATCTCGGTTACCACGCCGAGTGCTATGTTAACAGAGCTCAATATCGACTTTG
CTAATAGTGCTGTGACGCCGACGGCTTATGAACTTGCCTCACCCACACGACTGGTGTTGGATTTTCCCAATGTGAATAAT
CAAATTTCATCACGGATGCAAACTTATAACCAAGGCTATGTCAACAATGTCACCACGCTGACCAATGACAGTATGACACG
TATGATTATTGAACTGTCAAATCAAGCGACCTATAGTACGCGTGTGGTCAATAATCGCCTCGTTGTCTCCATGCAGCCGA
AGGGAAGCACCTCTGCAGTAACCACCGTAGCTACCAATCCAGCAATCGTTACACCGGTGGTGACTAGCCCTGTGGTTGTG
AGTCAGCCTGCTGTCGTCGTGACTGAACCTGCGCCTGTGATTGTCACGCCGCCACCTGTGGTCGTGCAAACGCCACCACC
TGTTGCCGTCGTGACCCAAACAACAAAAGCCGCCCCACCCGCCAATACGATGGTAGTCAAAGTTAATCCTTTATTAAATC
CTGCTGCCGCGGTTGTTCAACAATATAACTATGATGGTCTAGCGGCGATTAATTTTAATGGCACCTCGAACGGCGGCGGT
AATATTAGCGTTAATTTGGTAAATGACAGCATCCCTGTGGATGTGCAGCGCATGGGTGACGAGTTAGTTATTCGTTTGAC
AGGCGCCACCATTCCAAGTCGTCTACAAAAACAAATGACCGTAGGGAATGGCTTGGTGCGTGATGTTATCGCAACCAACC
AAGGACGCAATGGCGTGATTCGCATTGCCATGACAGGCGATTATGACTATAAAGCCTTTCAAACAGGTAATCAGCTAAAT
ATCAATATCGATCCCCCCAAACGTCTGCGCGAGCCGACCATTGAAGAACGTACCTACAGCGGGGCACCTTTATCACTAGA
ATTTCAAGATGTCAGCGTGCGTACGATTTTAGAAGTGTTGGCACAACATACCAATACCAATATCGTTGCTAGTGACAGCG
TCAGTGGTAATATTACCTTGCGTCTGATTAACGTGCCTTGGGATCAAGCCTTAGATATTATCCTAAAAAGTAAAAATTTG
GATAAACGGGTTAATGGTAATGTAATTTGGGTGGCACCCGCGGCAGAACTTGCCAAGCAAGAATCCGATGAGTTAAAAGC
GCAACAAGAGAAAAAAGTATTAGACCCACTGCGTACCGAATATATTCGACTTAACTATGCCAAAGCAGAAAATGTACGAA
CATTGATTGAAGCAGGCAGAGCAACATCCGATCGTTCGAGCGGCAATACCTCACTGTTAACAGACAGAGGTACAGTCACA
ATCGATACCAGAACCAACACTTTGATTGTTAAAGATACCGCTGAAACCATCAGCAATATCCGTGATTTGATTAGTAAAAT
CGATATCGCCGTCAAACAAGTGATGATTGAAGCCCGCATTGTGAGCGCGACAGACACCTTTAGTAAAGAACTTGGGGTGA
AATGGGGTATTTTATCGCAAGGCGCGGCAAGTAATCGTAACCTGCTGGTGGGTGGTAATTTAAGTACCATTGATAGCCTT
AAGACTTATACCACGGCTACAAATGCCGATGGCACTACCTATCCAGTCTATAGCGGTCTCACTGCCGCTAACAACCTCAG
TGTCAATCTAGGTGCAGCTAACCCTGCAGGCTCGATTGCCTTTGGCTTGTTGAGCATTTCAGATTTACTATTAGATTTAG
AATTGTCAGCCATGCAAGCGGATAACAAGGGTGAAGTCATCTCCAGTCCAAAAGTGCTAACCGCCGACAAACAAACCGCC
AAAATCATGTCAGGGACGCAAATCCCTTATCAAGAAGCCTCTGCCAGTGGGGCGACCTCAACGAGCTTTATTGAAGCGGC
ATTGAGTCTTGAAGTCACCCCTAATATTACCCCTGAAGGTCGTATTGGCATGGATTTGAGTATTGAAAATGGTTCACCAA
CCATCATTAATGGCGCGACAGCGGTTTCTAAAGATTCGATTAAAACCAATGTAGTCGTCGATGATGGTCAAACGGTTGTG
CTCGGTGGCGTGTTTAAAAATACCTTAGGTAACGATGTGACTAAAATCCCTTTCTTAGGAGATTTACCTTATGTTGATCG
CTTCTTTAAGCGCACCTCAAAAAGCAATAACAAGCAAGAATTATTGATTTTTGTGACCCCAAAATTGGTGAATGACACAG
GTCGTATCAATTAA

Domains

Predicted by InterProScan.

• Bacterial type II and III secretion system protein (Secretin) (617-770)

• Secretin and TonB N terminus short domain (STN) (367-413)

• Bacterial type II/III secretion system short domain (Secretin_N) (440-513)

• AMIN domain (AMIN) (48-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ/pilQ	Acinetobacter baylyi ADP1	50.166	77.477	0.389
pilQ	Acinetobacter baumannii D1279779	49.508	78.507	0.389
pilQ	Acinetobacter baumannii strain A118	49.508	78.507	0.389
pilQ	Pseudomonas aeruginosa PAK	36.481	99.485	0.363