Detailed information NTG0358149

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GSF12_RS00895
• Genome accession: NZ_CP047226
• Coordinates: 200377..201051 (-)
• Length: 224 a.a.
• NCBI ID: WP_007117251.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain YV1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 195377..206051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSF12_RS00865 (GSF12_00865)	-	196342..196749 (+)	408	WP_159374042.1	hypothetical protein	-
GSF12_RS00870 (GSF12_00870)	-	196813..197070 (+)	258	WP_050324926.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GSF12_RS00875 (GSF12_00875)	-	197186..197728 (+)	543	WP_159374043.1	hypothetical protein	-
GSF12_RS00880 (GSF12_00880)	-	197790..198365 (+)	576	WP_159374044.1	hydrolase	-
GSF12_RS00885 (GSF12_00885)	-	198402..198989 (+)	588	WP_159374045.1	HD domain-containing protein	-
GSF12_RS00890 (GSF12_00890)	clpX	199037..200320 (-)	1284	WP_159374046.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
GSF12_RS00895 (GSF12_00895)	clpP	200377..201051 (-)	675	WP_007117251.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
GSF12_RS00900 (GSF12_00900)	tig	201203..202570 (-)	1368	WP_159374047.1	trigger factor	-
GSF12_RS00905 (GSF12_00905)	rdgB	202901..203551 (-)	651	WP_159374048.1	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	-
GSF12_RS00910 (GSF12_00910)	-	204091..204717 (+)	627	WP_159374049.1	superoxide dismutase	-
GSF12_RS00915 (GSF12_00915)	panD	205033..205413 (-)	381	WP_036589204.1	aspartate 1-decarboxylase	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 24866.44 Da
• Isoelectric Point: 4.9809

>NTDB_id=358149 GSF12_RS00895 WP_007117251.1 200377..201051(-) (clpP) [Moraxella osloensis strain YV1]
MLEKFLDSPFATSQIQNTVTRDVLSPQSALVPMVVEQSARGERSFDIYSRLLRERVVFLAGQVEDHMANLIVAQLLFLEA
ENPEKDIHLYINSPGGSVSAGLAVFDTMNFIQPQVSTICMGGAYSMGSFLLAAGEKGKRYALANARVMIHQPSGGAQGQA
TDIEINAREILKIRERLNKILAERTGQPLEKIARDVERDYWLDAQEAKEYGLIDEVLEKRPSIA

Nucleotide

• Length: 675 bp

>NTDB_id=358149 GSF12_RS00895 WP_007117251.1 200377..201051(-) (clpP) [Moraxella osloensis strain YV1]
ATGTTAGAAAAATTCTTGGACTCGCCTTTCGCGACGAGTCAAATCCAAAATACCGTAACCCGTGACGTGTTGTCACCACA
AAGTGCTTTAGTACCTATGGTGGTCGAGCAATCGGCTCGCGGTGAGCGTTCATTTGACATCTATTCACGCCTATTACGTG
AGCGTGTGGTGTTCTTAGCCGGTCAAGTTGAAGACCACATGGCGAATTTAATTGTCGCCCAGTTGTTGTTCCTAGAAGCG
GAAAATCCAGAAAAAGACATTCACTTATACATCAATTCACCCGGTGGCTCTGTGAGTGCAGGTCTTGCCGTGTTTGACAC
CATGAACTTTATCCAGCCACAAGTGTCAACGATTTGTATGGGCGGTGCTTATAGCATGGGTTCATTCTTATTGGCTGCGG
GTGAAAAAGGTAAACGATATGCCTTAGCCAATGCGCGTGTGATGATTCACCAACCGTCAGGTGGGGCACAAGGTCAAGCG
ACCGATATTGAAATCAATGCGCGTGAAATCCTAAAAATCCGTGAACGCTTGAATAAAATCTTGGCAGAACGTACCGGTCA
GCCACTTGAGAAAATCGCCCGTGATGTCGAGCGTGACTATTGGTTAGATGCCCAAGAAGCCAAAGAATACGGTTTGATTG
ATGAAGTATTAGAAAAACGTCCAAGCATTGCTTAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (40-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	67.021	83.929	0.562
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.158	84.821	0.536
clpP	Lactococcus lactis subsp. cremoris KW2	59.375	85.714	0.509
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	57.292	85.714	0.491
clpP	Streptococcus pneumoniae R6	57.368	84.821	0.487
clpP	Streptococcus pneumoniae Rx1	57.368	84.821	0.487
clpP	Streptococcus pneumoniae D39	57.368	84.821	0.487
clpP	Streptococcus pneumoniae TIGR4	57.368	84.821	0.487
clpP	Streptococcus thermophilus LMG 18311	56.842	84.821	0.482
clpP	Streptococcus thermophilus LMD-9	56.842	84.821	0.482
clpP	Streptococcus mutans UA159	54.822	87.946	0.482
clpP	Streptococcus pyogenes JRS4	56.021	85.268	0.478
clpP	Streptococcus pyogenes MGAS315	56.021	85.268	0.478