Detailed information NTG0357784

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GR131_RS29510
• Genome accession: NZ_CP047147
• Coordinates: 6796403..6797005 (+)
• Length: 200 a.a.
• NCBI ID: WP_003952116.1
• Uniprot ID: A0ABR4SDT8
• Organism: Streptomyces sp. GF20
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 6791403..6802005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GR131_RS29475 (GR131_29475)	-	6791430..6792233 (+)	804	WP_159313657.1	ABC transporter ATP-binding protein	-
GR131_RS29480 (GR131_29480)	-	6792384..6793127 (+)	744	WP_236570852.1	VOC family protein	-
GR131_RS29485 (GR131_29485)	-	6793111..6793548 (-)	438	WP_159313658.1	DUF2267 domain-containing protein	-
GR131_RS29490 (GR131_29490)	-	6793676..6794107 (-)	432	WP_030766446.1	Hsp20/alpha crystallin family protein	-
GR131_RS29495 (GR131_29495)	-	6794259..6794933 (+)	675	WP_159313659.1	type III effector protein	-
GR131_RS29500 (GR131_29500)	-	6794989..6795627 (+)	639	WP_085478637.1	hypothetical protein	-
GR131_RS29505 (GR131_29505)	clpP	6795766..6796401 (+)	636	WP_008408790.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GR131_RS29510 (GR131_29510)	clpP	6796403..6797005 (+)	603	WP_003952116.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GR131_RS29515 (GR131_29515)	-	6797049..6797489 (-)	441	WP_328707463.1	helix-turn-helix transcriptional regulator	-
GR131_RS29520 (GR131_29520)	-	6797663..6798526 (-)	864	WP_018468882.1	glycoside hydrolase family 16 protein	-
GR131_RS29525 (GR131_29525)	-	6799008..6799562 (+)	555	WP_008408795.1	type 1 glutamine amidotransferase domain-containing protein	-
GR131_RS29530 (GR131_29530)	-	6799587..6799964 (+)	378	WP_129844471.1	VOC family protein	-
GR131_RS29535 (GR131_29535)	-	6799931..6801343 (-)	1413	WP_159313660.1	NAD(P)-binding protein	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 21565.37 Da
• Isoelectric Point: 5.0567

>NTDB_id=357784 GR131_RS29510 WP_003952116.1 6796403..6797005(+) (clpP) [Streptomyces sp. GF20]
MAQYTIPTVVERTARGERAFDIYSSLLSERIIFLGTEIDDGVANVVIAQLLHLESVAPDQEIALYINSPGGSYTSLMAVY
DTMTFVSAPLSTFCVGQAASTAAVLLAGGDPGRRLILEHARVLLGQPASGGSQGTVSDLTVQAKEVARVRSQTEEVLSRH
TGHSVERLRSDMDRDKVFTAEEAVAYGLADEVLTRRRPRG

Nucleotide

• Length: 603 bp

>NTDB_id=357784 GR131_RS29510 WP_003952116.1 6796403..6797005(+) (clpP) [Streptomyces sp. GF20]
ATGGCGCAGTACACGATCCCGACCGTCGTCGAGCGCACCGCCCGCGGCGAGCGGGCCTTCGACATCTACAGCAGTCTGCT
CTCCGAGCGGATCATCTTCCTCGGCACCGAGATCGACGACGGCGTCGCCAACGTCGTCATCGCCCAGCTCCTCCACCTGG
AGTCGGTCGCGCCCGACCAGGAGATCGCGCTGTACATCAACTCGCCCGGCGGCTCGTACACCTCGCTGATGGCGGTCTAC
GACACGATGACCTTCGTGTCGGCGCCCCTGTCGACCTTCTGCGTGGGCCAGGCCGCCTCCACCGCCGCCGTGCTGCTCGC
GGGCGGCGACCCGGGCCGGCGGCTGATCCTGGAGCACGCGCGGGTGCTGCTCGGGCAGCCGGCCAGCGGCGGCAGCCAGG
GCACCGTCTCCGACCTGACGGTGCAGGCCAAGGAGGTCGCCCGGGTCCGCAGCCAGACCGAGGAGGTCCTCTCCCGCCAC
ACCGGGCACAGCGTGGAGCGGCTGCGGTCGGACATGGACCGGGACAAGGTCTTCACCGCCGAGGAGGCCGTCGCCTACGG
CCTCGCGGACGAGGTGCTGACCCGCAGGCGTCCGCGGGGCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (15-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50.794	94.5	0.48
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	44.737	95	0.425
clpP	Lactococcus lactis subsp. cremoris KW2	39.791	95.5	0.38
clpP	Streptococcus pneumoniae TIGR4	38.542	96	0.37
clpP	Streptococcus pneumoniae R6	38.542	96	0.37
clpP	Streptococcus pneumoniae Rx1	38.542	96	0.37
clpP	Streptococcus pneumoniae D39	38.542	96	0.37
clpP	Streptococcus pyogenes JRS4	39.153	94.5	0.37
clpP	Streptococcus pyogenes MGAS315	39.153	94.5	0.37
clpP	Streptococcus mutans UA159	39.153	94.5	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	38.22	95.5	0.365