Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GR131_RS29505 | Genome accession | NZ_CP047147 |
| Coordinates | 6795766..6796401 (+) | Length | 211 a.a. |
| NCBI ID | WP_008408790.1 | Uniprot ID | A0ABR4SDX2 |
| Organism | Streptomyces sp. GF20 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 6790766..6801401
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GR131_RS29475 (GR131_29475) | - | 6791430..6792233 (+) | 804 | WP_159313657.1 | ABC transporter ATP-binding protein | - |
| GR131_RS29480 (GR131_29480) | - | 6792384..6793127 (+) | 744 | WP_236570852.1 | VOC family protein | - |
| GR131_RS29485 (GR131_29485) | - | 6793111..6793548 (-) | 438 | WP_159313658.1 | DUF2267 domain-containing protein | - |
| GR131_RS29490 (GR131_29490) | - | 6793676..6794107 (-) | 432 | WP_030766446.1 | Hsp20/alpha crystallin family protein | - |
| GR131_RS29495 (GR131_29495) | - | 6794259..6794933 (+) | 675 | WP_159313659.1 | type III effector protein | - |
| GR131_RS29500 (GR131_29500) | - | 6794989..6795627 (+) | 639 | WP_085478637.1 | hypothetical protein | - |
| GR131_RS29505 (GR131_29505) | clpP | 6795766..6796401 (+) | 636 | WP_008408790.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| GR131_RS29510 (GR131_29510) | clpP | 6796403..6797005 (+) | 603 | WP_003952116.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| GR131_RS29515 (GR131_29515) | - | 6797049..6797489 (-) | 441 | WP_328707463.1 | helix-turn-helix transcriptional regulator | - |
| GR131_RS29520 (GR131_29520) | - | 6797663..6798526 (-) | 864 | WP_018468882.1 | glycoside hydrolase family 16 protein | - |
| GR131_RS29525 (GR131_29525) | - | 6799008..6799562 (+) | 555 | WP_008408795.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| GR131_RS29530 (GR131_29530) | - | 6799587..6799964 (+) | 378 | WP_129844471.1 | VOC family protein | - |
| GR131_RS29535 (GR131_29535) | - | 6799931..6801343 (-) | 1413 | WP_159313660.1 | NAD(P)-binding protein | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22743.65 Da Isoelectric Point: 5.3071
>NTDB_id=357783 GR131_RS29505 WP_008408790.1 6795766..6796401(+) (clpP) [Streptomyces sp. GF20]
MAPSHPAWSAAEAETAPTRYDDQLAGQLLTQRIVLLGTQVDETSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLA
IYDTMRLIPNDVSTLAMGFAASMGQFLLTVGTAGKRFALPNARIMMHQPSAGIGGSAADIAIQAENLEFTKRAIERLTAE
HTGRSEAEISRDSDRDRWFTAEQAKEYGMVDRVVHTLDDVRPSGARRKAGI
MAPSHPAWSAAEAETAPTRYDDQLAGQLLTQRIVLLGTQVDETSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLA
IYDTMRLIPNDVSTLAMGFAASMGQFLLTVGTAGKRFALPNARIMMHQPSAGIGGSAADIAIQAENLEFTKRAIERLTAE
HTGRSEAEISRDSDRDRWFTAEQAKEYGMVDRVVHTLDDVRPSGARRKAGI
Nucleotide
Download Length: 636 bp
>NTDB_id=357783 GR131_RS29505 WP_008408790.1 6795766..6796401(+) (clpP) [Streptomyces sp. GF20]
ATGGCGCCCTCGCACCCCGCCTGGTCGGCCGCTGAGGCGGAGACCGCACCCACCCGCTACGACGACCAGCTCGCCGGACA
ACTGCTCACCCAGCGCATCGTCCTGCTCGGCACCCAGGTCGACGAGACCTCCGCCAACCGGGTCTGCGCCCAGCTGCTCC
TGCTGTCGGCGGAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCCGGCGGCTCGGTCACCGCCGGGCTCGCC
ATCTACGACACGATGCGGCTGATCCCCAACGACGTGTCGACGCTCGCCATGGGGTTCGCCGCCAGCATGGGCCAGTTCCT
GCTGACGGTGGGAACGGCCGGCAAGCGGTTCGCGCTGCCCAACGCGCGCATCATGATGCACCAGCCCTCGGCGGGCATCG
GCGGATCCGCCGCCGACATCGCCATCCAGGCCGAGAACCTGGAGTTCACCAAGCGCGCCATCGAGCGGCTGACGGCCGAG
CACACCGGCCGCAGCGAGGCCGAGATCAGCCGGGACAGCGACCGCGACCGCTGGTTCACCGCCGAACAGGCCAAGGAGTA
CGGGATGGTGGACCGGGTCGTCCACACTCTGGACGACGTCCGCCCCTCCGGCGCGCGGCGGAAGGCGGGGATCTGA
ATGGCGCCCTCGCACCCCGCCTGGTCGGCCGCTGAGGCGGAGACCGCACCCACCCGCTACGACGACCAGCTCGCCGGACA
ACTGCTCACCCAGCGCATCGTCCTGCTCGGCACCCAGGTCGACGAGACCTCCGCCAACCGGGTCTGCGCCCAGCTGCTCC
TGCTGTCGGCGGAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCCGGCGGCTCGGTCACCGCCGGGCTCGCC
ATCTACGACACGATGCGGCTGATCCCCAACGACGTGTCGACGCTCGCCATGGGGTTCGCCGCCAGCATGGGCCAGTTCCT
GCTGACGGTGGGAACGGCCGGCAAGCGGTTCGCGCTGCCCAACGCGCGCATCATGATGCACCAGCCCTCGGCGGGCATCG
GCGGATCCGCCGCCGACATCGCCATCCAGGCCGAGAACCTGGAGTTCACCAAGCGCGCCATCGAGCGGCTGACGGCCGAG
CACACCGGCCGCAGCGAGGCCGAGATCAGCCGGGACAGCGACCGCGACCGCTGGTTCACCGCCGAACAGGCCAAGGAGTA
CGGGATGGTGGACCGGGTCGTCCACACTCTGGACGACGTCCGCCCCTCCGGCGCGCGGCGGAAGGCGGGGATCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
50 |
85.308 |
0.427 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
48.864 |
83.412 |
0.408 |
| clpP | Streptococcus pneumoniae D39 |
46.893 |
83.886 |
0.393 |
| clpP | Streptococcus pneumoniae R6 |
46.893 |
83.886 |
0.393 |
| clpP | Streptococcus pneumoniae TIGR4 |
46.893 |
83.886 |
0.393 |
| clpP | Streptococcus pneumoniae Rx1 |
46.893 |
83.886 |
0.393 |
| clpP | Streptococcus pyogenes JRS4 |
46.893 |
83.886 |
0.393 |
| clpP | Streptococcus pyogenes MGAS315 |
46.893 |
83.886 |
0.393 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
46.369 |
84.834 |
0.393 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.81 |
84.834 |
0.389 |
| clpP | Streptococcus mutans UA159 |
44.693 |
84.834 |
0.379 |
| clpP | Streptococcus thermophilus LMD-9 |
45.198 |
83.886 |
0.379 |
| clpP | Streptococcus thermophilus LMG 18311 |
45.198 |
83.886 |
0.379 |