Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | E4K03_RS03965 | Genome accession | NZ_CP038262 |
| Coordinates | 815447..815929 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046418.1 | Uniprot ID | A0A0J8UYN7 |
| Organism | Acinetobacter baumannii strain LEV1449/17Ec | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 810447..820929
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4K03_RS03955 (E4K03_03955) | pilX | 810750..811568 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| E4K03_RS03960 (E4K03_03960) | pilY1 | 811580..815434 (+) | 3855 | WP_000768940.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| E4K03_RS03965 (E4K03_03965) | pilY2 | 815447..815929 (+) | 483 | WP_001046418.1 | type IV pilin protein | Machinery gene |
| E4K03_RS03970 (E4K03_03970) | pilE | 815926..816351 (+) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| E4K03_RS03975 (E4K03_03975) | rpsP | 816498..816749 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| E4K03_RS03980 (E4K03_03980) | rimM | 816769..817317 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| E4K03_RS03985 (E4K03_03985) | trmD | 817363..818103 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| E4K03_RS03990 (E4K03_03990) | rplS | 818311..818679 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| E4K03_RS03995 (E4K03_03995) | - | 818731..819672 (-) | 942 | WP_085943440.1 | triacylglycerol lipase | - |
| E4K03_RS04000 (E4K03_04000) | - | 819787..820818 (-) | 1032 | WP_002125597.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17533.80 Da Isoelectric Point: 8.4817
>NTDB_id=352866 E4K03_RS03965 WP_001046418.1 815447..815929(+) (pilY2) [Acinetobacter baumannii strain LEV1449/17Ec]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=352866 E4K03_RS03965 WP_001046418.1 815447..815929(+) (pilY2) [Acinetobacter baumannii strain LEV1449/17Ec]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
95.625 |
100 |
0.956 |
| comE | Acinetobacter baylyi ADP1 |
41.279 |
100 |
0.444 |