Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EWH46_RS20820 | Genome accession | NZ_CP035708 |
| Coordinates | 3284414..3284890 (-) | Length | 158 a.a. |
| NCBI ID | WP_149505346.1 | Uniprot ID | - |
| Organism | Sphaerotilus sulfidivorans strain D-507 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3279414..3289890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EWH46_RS14870 (EWH46_14865) | - | 3279647..3281224 (-) | 1578 | WP_244954325.1 | M48 family metalloprotease | - |
| EWH46_RS14875 (EWH46_14870) | moaC | 3281367..3281852 (+) | 486 | WP_149504581.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| EWH46_RS14880 (EWH46_14875) | - | 3281982..3283754 (-) | 1773 | WP_149504582.1 | PglL family O-oligosaccharyltransferase | - |
| EWH46_RS20535 (EWH46_14880) | - | 3283811..3284215 (-) | 405 | WP_420821119.1 | pilin | - |
| EWH46_RS20820 (EWH46_14885) | pilA | 3284414..3284890 (-) | 477 | WP_149505346.1 | pilin | Machinery gene |
| EWH46_RS14895 (EWH46_14890) | groL | 3285199..3286845 (-) | 1647 | WP_037481960.1 | chaperonin GroEL | - |
| EWH46_RS14900 (EWH46_14895) | - | 3286916..3287206 (-) | 291 | WP_037481959.1 | co-chaperone GroES | - |
| EWH46_RS14905 (EWH46_14900) | - | 3287448..3288794 (+) | 1347 | WP_149504583.1 | DUF3422 family protein | - |
Sequence
Protein
Download Length: 158 a.a. Molecular weight: 15942.19 Da Isoelectric Point: 8.4858
>NTDB_id=344026 EWH46_RS20820 WP_149505346.1 3284414..3284890(-) (pilA) [Sphaerotilus sulfidivorans strain D-507]
MKRAQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEGLSLAAGAKATVAENAANGAPLKSGFQAPEPTKNVASV
SISETTGEITITFTSAIDNGATLVLAPRDGANALSGTATASTIPASGSITWNCLSAASTRDGAKGTIKGKYVPAECRS
MKRAQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEGLSLAAGAKATVAENAANGAPLKSGFQAPEPTKNVASV
SISETTGEITITFTSAIDNGATLVLAPRDGANALSGTATASTIPASGSITWNCLSAASTRDGAKGTIKGKYVPAECRS
Nucleotide
Download Length: 477 bp
>NTDB_id=344026 EWH46_RS20820 WP_149505346.1 3284414..3284890(-) (pilA) [Sphaerotilus sulfidivorans strain D-507]
ATGAAGCGCGCGCAACAAGGTTTTACGCTTATCGAACTGATGATCGTCGTGGCGATCATCGGCATCCTGGCGGCGGTGGC
ACTGCCGGCCTATCAGGACTACACGGTCCGCGCCAAGGTTTCGGAAGGTCTGTCGCTGGCGGCTGGCGCGAAGGCCACGG
TGGCAGAGAACGCGGCGAACGGTGCTCCGCTGAAATCAGGCTTCCAAGCCCCTGAACCGACCAAGAACGTTGCTAGCGTC
AGCATCAGTGAAACTACGGGCGAGATCACCATCACGTTCACTTCGGCAATTGATAATGGGGCTACGCTTGTTCTGGCTCC
GCGTGATGGGGCCAATGCGCTGTCGGGCACGGCGACGGCATCTACGATTCCGGCCAGCGGTTCTATCACTTGGAATTGCC
TGTCAGCAGCTTCCACTCGTGACGGAGCCAAGGGCACGATCAAGGGCAAGTACGTCCCGGCCGAATGCCGTAGCTGA
ATGAAGCGCGCGCAACAAGGTTTTACGCTTATCGAACTGATGATCGTCGTGGCGATCATCGGCATCCTGGCGGCGGTGGC
ACTGCCGGCCTATCAGGACTACACGGTCCGCGCCAAGGTTTCGGAAGGTCTGTCGCTGGCGGCTGGCGCGAAGGCCACGG
TGGCAGAGAACGCGGCGAACGGTGCTCCGCTGAAATCAGGCTTCCAAGCCCCTGAACCGACCAAGAACGTTGCTAGCGTC
AGCATCAGTGAAACTACGGGCGAGATCACCATCACGTTCACTTCGGCAATTGATAATGGGGCTACGCTTGTTCTGGCTCC
GCGTGATGGGGCCAATGCGCTGTCGGGCACGGCGACGGCATCTACGATTCCGGCCAGCGGTTCTATCACTTGGAATTGCC
TGTCAGCAGCTTCCACTCGTGACGGAGCCAAGGGCACGATCAAGGGCAAGTACGTCCCGGCCGAATGCCGTAGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
53.012 |
100 |
0.557 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.267 |
100 |
0.475 |
| pilA2 | Legionella pneumophila str. Paris |
47.468 |
100 |
0.475 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
46.203 |
100 |
0.462 |
| comP | Acinetobacter baylyi ADP1 |
41.176 |
100 |
0.443 |
| pilE | Neisseria gonorrhoeae MS11 |
38.333 |
100 |
0.437 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.989 |
100 |
0.43 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
35.802 |
100 |
0.367 |