Detailed information NTG0034391

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SDEG_RS04970
• Genome accession: NC_012891
• Coordinates: 991052..991894 (-)
• Length: 280 a.a.
• NCBI ID: WP_012766957.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis GGS_124
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 986052..996894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDEG_RS04955 (SDEG_1005)	-	986893..987837 (+)	945	WP_012766955.1	IS982 family transposase	-
SDEG_RS10620 (SDEG_1007)	-	987860..988743 (+)	884	Protein_942	LysR family transcriptional regulator	-
SDEG_RS04965 (SDEG_1008)	topA	988819..990951 (-)	2133	WP_012766956.1	type I DNA topoisomerase	-
SDEG_RS04970 (SDEG_1009)	dprA	991052..991894 (-)	843	WP_012766957.1	DNA-processing protein DprA	Machinery gene
SDEG_RS04975 (SDEG_1010)	-	992001..992771 (-)	771	WP_003061556.1	ribonuclease HII	-
SDEG_RS04980 (SDEG_1011)	ylqF	992761..993609 (-)	849	WP_012766958.1	ribosome biogenesis GTPase YlqF	-
SDEG_RS04985 (SDEG_1012)	-	994332..994562 (-)	231	WP_003062326.1	hypothetical protein	-
SDEG_RS04990 (SDEG_1013)	-	994781..995668 (-)	888	WP_012766959.1	Rgg/GadR/MutR family transcriptional regulator	-
SDEG_RS04995 (SDEG_1014)	-	996008..996448 (+)	441	WP_012766960.1	DUF1836 domain-containing protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31313.28 Da
• Isoelectric Point: 8.8103

>NTDB_id=34391 SDEG_RS04970 WP_012766957.1 991052..991894(-) (dprA) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
MNHFELYKLKKAGLTNNNILNILDYQKYQEKSLSLRDMAVVSGCKHPSHFIETYKQLDIQKLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLDKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AVIGTGLDRFYPKENQELQTFLGRKHLILTEYGPGEEPLSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGESEGCLQLIKEGATCVTSGMDILSEYQK

Nucleotide

• Length: 843 bp

>NTDB_id=34391 SDEG_RS04970 WP_012766957.1 991052..991894(-) (dprA) [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAGGCTGGACTGACTAATAACAATATTCTCAATATTCTTGACTACCAAAA
ATATCAGGAAAAATCGTTGTCGCTTCGAGACATGGCCGTTGTTTCCGGTTGTAAGCACCCGTCTCACTTTATAGAAACCT
ATAAGCAGTTAGATATCCAAAAGTTAAAAATGGAATTTAAACAATTCCCTAGTATTTCTATCCTAGATAAACATTACCCA
ATGGCTTTGAAAGAAATATATAATCCGCCCGTCCTCTTGTTTTTTCAAGGCAATTTAGACCTTCTTGATAAACCTAAATT
AGCCATTGTGGGCTCAAGGCGCTCAAGCGATACCGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTCAGCGGACTTGCTCGAGGTATTGACACTAGTGCACATTTAGCCTGTCTTAAAAACGGAGGACAAACCATT
GCGGTGATAGGAACAGGATTAGACCGTTTTTATCCCAAAGAAAATCAAGAATTACAAACATTCTTAGGAAGGAAACACCT
TATCTTGACGGAATACGGTCCAGGAGAAGAACCACTATCGTATCACTTTCCGGAACGCAATCGTATTATTGCAGGGCTTA
GTCGAGGTATTCTCGTCGTTGAAGCAAAAAATCGCTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAGGGTCGA
GATATTTTTGCTGTTCCAGGAAACATTTTGGACGGCGAATCTGAAGGTTGTTTACAGCTTATAAAAGAGGGAGCAACCTG
CGTCACATCAGGGATGGACATCCTTTCTGAATATCAAAAATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (68-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.906	99.286	0.664
dprA/cilB/dalA	Streptococcus mitis SK321	60.573	99.643	0.604
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	60.573	99.643	0.604
dprA/cilB/dalA	Streptococcus pneumoniae D39	60.573	99.643	0.604
dprA/cilB/dalA	Streptococcus pneumoniae R6	60.573	99.643	0.604
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	60.573	99.643	0.604
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	60.215	99.643	0.6
dprA	Lactococcus lactis subsp. cremoris KW2	57.194	99.286	0.568
dprA	Legionella pneumophila strain ERS1305867	43.333	85.714	0.371
dprA	Haemophilus influenzae Rd KW20	38.202	95.357	0.364
dprA	Acinetobacter baumannii D1279779	38.202	95.357	0.364