Detailed information NTG0343189

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: F8M43_RS06645
• Genome accession: NZ_CP044498
• Coordinates: 1270642..1271778 (+)
• Length: 378 a.a.
• NCBI ID: WP_010886491.1
• Uniprot ID: Q00828
• Organism: Bacillus subtilis strain ms-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1265642..1276778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F8M43_RS06625	uxaA	1266092..1267585 (+)	1494	WP_015715723.1	altronate dehydratase family protein	-
F8M43_RS06630	yjnA	1267624..1268388 (-)	765	WP_014476525.1	sulfite exporter TauE/SafE family protein	-
F8M43_RS06635	bstD	1268613..1269077 (-)	465	WP_003245144.1	DinB family protein	-
F8M43_RS06640	yjoB	1269226..1270497 (+)	1272	WP_003245490.1	ATPase YjoB	-
F8M43_RS06645	rapC	1270642..1271778 (+)	1137	WP_010886491.1	response regulator aspartate phosphatase RapA	Regulator
F8M43_RS06650	phrA	1271768..1271902 (+)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
F8M43_RS06655	yjpA	1271933..1272190 (-)	258	WP_003232731.1	YciI family protein	-
F8M43_RS06660	xlyB	1272311..1273264 (+)	954	WP_003244876.1	N-acetylmuramoyl-L-alanine amidase	-
F8M43_RS06665	yjqA	1273304..1273681 (-)	378	WP_003245254.1	PH domain-containing protein	-
F8M43_RS06670	pghB	1273787..1274389 (+)	603	WP_003244789.1	poly-gamma-glutamate hydrolase family protein	-
F8M43_RS06675	xpdC	1274466..1275302 (+)	837	WP_003245071.1	manganese catalase family protein	-
F8M43_RS06680	xkdA	1275346..1275942 (-)	597	WP_003232721.1	ImmA/IrrE family metallo-endopeptidase	-
F8M43_RS06685	xre	1276105..1276446 (-)	342	WP_003232719.1	HTH-type transcriptional regulator Xre	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44974.16 Da
• Isoelectric Point: 4.7611

>NTDB_id=343189 F8M43_RS06645 WP_010886491.1 1270642..1271778(+) (rapC) [Bacillus subtilis strain ms-2]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFGKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=343189 F8M43_RS06645 WP_010886491.1 1270642..1271778(+) (rapC) [Bacillus subtilis strain ms-2]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCACCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTGTTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCAGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCTGCCCTATATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGGGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCAGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-293)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

3D structure

• AlphaFold DB: Q00828

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.681	99.471	0.444
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418