Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT51_RS08745 Genome accession   NZ_CP035448
Coordinates   1743024..1743737 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm70     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1738024..1748737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT51_RS08735 (ETT51_08885) treC 1739095..1740723 (-) 1629 WP_063632545.1 alpha,alpha-phosphotrehalase -
  ETT51_RS08740 (ETT51_08890) treP 1740790..1742814 (-) 2025 WP_063632546.1 PTS system trehalose-specific EIIBC component -
  ETT51_RS08745 (ETT51_08895) treR 1743024..1743737 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  ETT51_RS08750 (ETT51_08905) - 1744017..1744354 (-) 338 Protein_1654 winged helix-turn-helix transcriptional regulator -
  ETT51_RS08755 (ETT51_08910) - 1744541..1745398 (+) 858 WP_063632547.1 VOC family protein -
  ETT51_RS08760 (ETT51_08915) yaaA 1745440..1746171 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  ETT51_RS08765 (ETT51_08920) nrdG 1746345..1746959 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT51_RS08770 (ETT51_08925) - 1746959..1747468 (-) 510 WP_011285262.1 GNAT family N-acetyltransferase -
  ETT51_RS08775 (ETT51_08930) - 1747477..1748412 (-) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  ETT51_RS09255 - 1748441..1748587 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=342153 ETT51_RS08745 WP_002992823.1 1743024..1743737(+) (treR) [Streptococcus pyogenes strain emm70]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342153 ETT51_RS08745 WP_002992823.1 1743024..1743737(+) (treR) [Streptococcus pyogenes strain emm70]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment