Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ETT51_RS04720 Genome accession   NZ_CP035448
Coordinates   889952..890131 (+) Length   59 a.a.
NCBI ID   WP_136059210.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm70     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 854303..896574 889952..890131 within 0


Gene organization within MGE regions


Location: 854303..896574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT51_RS04475 (ETT51_04515) - 854303..855499 (-) 1197 WP_136059220.1 site-specific integrase -
  ETT51_RS04480 (ETT51_04520) - 855683..857104 (-) 1422 WP_014635616.1 DUF4041 domain-containing protein -
  ETT51_RS04485 (ETT51_04525) - 857119..857505 (-) 387 WP_023605207.1 ImmA/IrrE family metallo-endopeptidase -
  ETT51_RS04490 (ETT51_04530) - 857489..857830 (-) 342 WP_011888679.1 helix-turn-helix domain-containing protein -
  ETT51_RS04495 (ETT51_04535) - 858028..858240 (+) 213 WP_014635614.1 DNA-binding protein -
  ETT51_RS04500 (ETT51_04540) - 858268..858987 (+) 720 WP_011888681.1 phage antirepressor KilAC domain-containing protein -
  ETT51_RS04505 (ETT51_04545) - 859085..859324 (-) 240 WP_011284879.1 hypothetical protein -
  ETT51_RS04510 (ETT51_04550) - 859491..859676 (+) 186 WP_011054585.1 helix-turn-helix domain-containing protein -
  ETT51_RS04515 (ETT51_04555) - 859747..860004 (+) 258 WP_022554795.1 hypothetical protein -
  ETT51_RS04520 (ETT51_04560) - 860159..860347 (+) 189 WP_029713981.1 hypothetical protein -
  ETT51_RS04525 (ETT51_04565) dnaB 860334..861680 (+) 1347 WP_136098296.1 replicative DNA helicase -
  ETT51_RS04530 (ETT51_04570) - 861667..862413 (+) 747 WP_111685852.1 conserved phage C-terminal domain-containing protein -
  ETT51_RS04535 (ETT51_04575) - 862414..863235 (+) 822 WP_111685853.1 ATP-binding protein -
  ETT51_RS04540 (ETT51_04580) - 863235..863465 (+) 231 WP_136282147.1 hypothetical protein -
  ETT51_RS04545 - 863476..863640 (+) 165 WP_153276856.1 hypothetical protein -
  ETT51_RS04550 (ETT51_04585) - 863627..864118 (+) 492 WP_136059218.1 MazG-like family protein -
  ETT51_RS04555 (ETT51_04590) - 864115..864420 (+) 306 WP_136026311.1 DUF1372 family protein -
  ETT51_RS04560 (ETT51_04595) - 864514..864783 (+) 270 WP_231480305.1 DUF3310 domain-containing protein -
  ETT51_RS04565 (ETT51_04600) - 864776..865060 (+) 285 WP_136059217.1 hypothetical protein -
  ETT51_RS04570 (ETT51_04610) ssbA 865305..865697 (+) 393 WP_136059216.1 single-stranded DNA-binding protein Machinery gene
  ETT51_RS04575 (ETT51_04615) - 865711..865989 (+) 279 WP_029713970.1 hypothetical protein -
  ETT51_RS04580 (ETT51_04620) - 865986..866324 (+) 339 WP_085577390.1 helix-turn-helix domain-containing protein -
  ETT51_RS04585 (ETT51_04625) - 866327..866575 (+) 249 WP_085577391.1 hypothetical protein -
  ETT51_RS09190 - 866760..866909 (+) 150 WP_168391464.1 hypothetical protein -
  ETT51_RS04590 (ETT51_04635) - 866878..867078 (+) 201 WP_085577392.1 hypothetical protein -
  ETT51_RS04595 (ETT51_04640) - 867102..867521 (+) 420 WP_085577393.1 DUF1492 domain-containing protein -
  ETT51_RS04600 (ETT51_04645) - 867616..868179 (+) 564 WP_180383159.1 site-specific integrase -
  ETT51_RS04605 (ETT51_04650) - 868351..868644 (+) 294 WP_002986191.1 hypothetical protein -
  ETT51_RS04610 (ETT51_04655) - 868641..868970 (+) 330 WP_085577395.1 HNH endonuclease -
  ETT51_RS04615 (ETT51_04660) - 869092..869439 (+) 348 WP_002986187.1 hypothetical protein -
  ETT51_RS04620 (ETT51_04665) - 869420..871078 (+) 1659 WP_136059215.1 terminase TerL endonuclease subunit -
  ETT51_RS04625 (ETT51_04670) - 871277..872512 (+) 1236 WP_003057282.1 phage portal protein -
  ETT51_RS04630 (ETT51_04675) - 872516..873232 (+) 717 WP_002986180.1 head maturation protease, ClpP-related -
  ETT51_RS04635 (ETT51_04680) - 873268..874461 (+) 1194 WP_002986177.1 phage major capsid protein -
  ETT51_RS04640 (ETT51_04685) - 874476..874763 (+) 288 WP_002986176.1 hypothetical protein -
  ETT51_RS04645 (ETT51_04690) - 874783..875076 (+) 294 WP_136059214.1 phage gp6-like head-tail connector protein -
  ETT51_RS04650 (ETT51_04695) - 875078..875455 (+) 378 WP_227874190.1 phage head-tail adapter protein -
  ETT51_RS04655 (ETT51_04700) - 875427..875798 (+) 372 WP_002986170.1 hypothetical protein -
  ETT51_RS04660 (ETT51_04705) - 875807..876229 (+) 423 WP_002986168.1 hypothetical protein -
  ETT51_RS04665 (ETT51_04710) - 876240..876827 (+) 588 WP_003057267.1 hypothetical protein -
  ETT51_RS04670 (ETT51_04715) - 876848..877219 (+) 372 WP_002986164.1 hypothetical protein -
  ETT51_RS09195 - 877255..877413 (+) 159 WP_002986162.1 hypothetical protein -
  ETT51_RS04675 (ETT51_04720) - 877487..880723 (+) 3237 WP_085577397.1 phage tail tape measure protein -
  ETT51_RS04680 (ETT51_04725) - 880720..881430 (+) 711 WP_085577398.1 phage tail domain-containing protein -
  ETT51_RS04685 (ETT51_04730) - 881469..883478 (+) 2010 WP_197032753.1 phage tail spike protein -
  ETT51_RS04690 (ETT51_04735) hylP 883475..884497 (+) 1023 WP_020837648.1 hyaluronidase HylP -
  ETT51_RS04695 (ETT51_04740) - 884510..886396 (+) 1887 WP_111702896.1 gp58-like family protein -
  ETT51_RS04700 (ETT51_04745) - 886408..886836 (+) 429 WP_014411850.1 DUF1617 family protein -
  ETT51_RS04705 (ETT51_04750) - 886839..887465 (+) 627 WP_136059212.1 hypothetical protein -
  ETT51_RS04710 (ETT51_04755) - 887481..887936 (+) 456 WP_002988455.1 phage holin family protein -
  ETT51_RS09440 - 887938..888060 (+) 123 WP_027968869.1 hypothetical protein -
  ETT51_RS04715 (ETT51_04760) - 888048..889256 (+) 1209 WP_136059211.1 glucosaminidase domain-containing protein -
  ETT51_RS04720 (ETT51_04765) prx 889952..890131 (+) 180 WP_136059210.1 Paratox Regulator
  ETT51_RS04725 (ETT51_04770) - 890365..890880 (+) 516 Protein_878 elongation factor 4 -
  ETT51_RS04730 (ETT51_04775) slc2 891067..892608 (+) 1542 WP_156139411.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  ETT51_RS04735 (ETT51_04780) - 892767..893064 (+) 298 Protein_880 nucleoside-diphosphate kinase -
  ETT51_RS04740 (ETT51_04785) lepA 893134..894966 (+) 1833 WP_010922253.1 translation elongation factor 4 -
  ETT51_RS04745 (ETT51_04790) slc2 895153..896574 (+) 1422 WP_156139412.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6746.66 Da        Isoelectric Point: 3.9417

>NTDB_id=342135 ETT51_RS04720 WP_136059210.1 889952..890131(+) (prx) [Streptococcus pyogenes strain emm70]
MLTYDEFKQAIDDGYITADAVMIVRKSGQIFDYVLPHEKVKNGEVVTEEVVEEVLVELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=342135 ETT51_RS04720 WP_136059210.1 889952..890131(+) (prx) [Streptococcus pyogenes strain emm70]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGATGACGGCTATATCACAGCAGACGCAGTAATGATCGTGCGCAAGAG
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACGGAGGAAGTGGTGGAAGAGG
TGCTGGTGGAATTAGAGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

86.207

98.305

0.847

  prx Streptococcus pyogenes MGAS8232

86.207

98.305

0.847

  prx Streptococcus pyogenes MGAS315

79.661

100

0.797

  prx Streptococcus pyogenes MGAS315

74.576

100

0.746

  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61

  prx Streptococcus pyogenes MGAS315

80.488

69.492

0.559

  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508


Multiple sequence alignment