Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ETT70_RS04740 Genome accession   NZ_CP035429
Coordinates   896565..897407 (+) Length   280 a.a.
NCBI ID   WP_109821151.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 891565..902407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS04710 (ETT70_04700) - 892030..892467 (+) 438 WP_031488279.1 hypothetical protein -
  ETT70_RS04715 (ETT70_04705) - 892517..893428 (-) 912 WP_002984631.1 diacylglycerol kinase family protein -
  ETT70_RS04720 (ETT70_04710) - 893545..894195 (-) 651 WP_002984629.1 hemolysin III family protein -
  ETT70_RS04725 (ETT70_04715) - 894192..894632 (-) 441 WP_011017769.1 DUF1836 domain-containing protein -
  ETT70_RS04730 (ETT70_04720) ylqF 894851..895699 (+) 849 WP_136275844.1 ribosome biogenesis GTPase YlqF -
  ETT70_RS04735 (ETT70_04725) - 895689..896459 (+) 771 WP_022554642.1 ribonuclease HII -
  ETT70_RS04740 (ETT70_04730) dprA 896565..897407 (+) 843 WP_109821151.1 DNA-processing protein DprA Machinery gene
  ETT70_RS04745 (ETT70_04735) topA 897508..899637 (+) 2130 WP_136275845.1 type I DNA topoisomerase -
  ETT70_RS09225 - 899713..900570 (-) 858 Protein_869 LysR family transcriptional regulator -
  ETT70_RS04760 (ETT70_04750) - 900610..901176 (+) 567 Protein_870 PTS sugar transporter subunit IIC -
  ETT70_RS04765 (ETT70_04755) - 901191..902143 (+) 953 Protein_871 D-lactate dehydrogenase -

Sequence


Protein


Download         Length: 280 a.a.        Molecular weight: 31327.30 Da        Isoelectric Point: 8.8103

>NTDB_id=341116 ETT70_RS04740 WP_109821151.1 896565..897407(+) (dprA) [Streptococcus pyogenes strain emmNA]
MNHFELYKLKKAGLTNNNILNILDYQKYQEKSLSLRDMAVVSGCKHPSHFIETYKQLDIQKLKMEFKQFPSISILDKHYP
MALKEIYNPPVLLFFQGNLDLLDKPKLAIIGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTI
AVIGTGLDRFYPKENQELQTFLGRKHLILTEYGPGEEPLSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGR
DIFAVPGNILDGESEGCLQLIKEGATCVTSGMDILSEYQK

Nucleotide


Download         Length: 843 bp        

>NTDB_id=341116 ETT70_RS04740 WP_109821151.1 896565..897407(+) (dprA) [Streptococcus pyogenes strain emmNA]
GTGAATCATTTTGAACTTTATAAGCTAAAGAAAGCTGGACTGACTAATAACAATATTCTCAATATTCTTGACTACCAAAA
ATATCAGGAAAAATCGTTGTCGCTTCGAGACATGGCCGTTGTTTCCGGTTGTAAGCACCCGTCTCACTTTATAGAAACCT
ATAAGCAGTTAGATATCCAAAAGTTAAAAATGGAATTTAAACAATTTCCTAGTATTTCTATCCTAGATAAACATTACCCA
ATGGCTTTGAAAGAAATATATAATCCGCCCGTCCTCTTGTTTTTTCAAGGCAATTTAGACCTTCTTGATAAACCTAAATT
AGCCATTATTGGCTCCAGGCGCTCAAGCGATACTGGAGTAAAGTCTGTCCGTAAAATTCTTAAAGAACTCGGGAACCGTT
TTGTGATTGTCAGCGGACTTGCTCGAGGTATTGACACTAGTGCACATTTAGCCTGTCTTAAAAACGGAGGACAAACCATT
GCGGTGATAGGAACAGGATTAGACCGTTTTTATCCCAAAGAAAATCAAGAATTACAAACATTCTTAGGAAGGAAACACCT
TATCTTGACGGAATACGGTCCAGGAGAAGAACCACTATCGTATCACTTTCCGGAACGCAATCGTATTATTGCAGGGCTTA
GTCGAGGTATTCTCGTCGTTGAAGCAAAAAATCGCTCAGGTTCCTTGATTACTTGTCAAATTGGGATAGAAGAGGGTCGA
GATATTTTTGCTGTTCCAGGAAACATTTTGGACGGCGAATCTGAAGGTTGTTTACAGCTTATAAAAGAGGGAGCAACCTG
CGTCACATCAGGGATGGACATCCTTTCTGAATATCAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Streptococcus mutans UA159

66.547

99.286

0.661

  dprA/cilB/dalA Streptococcus mitis SK321

60.215

99.643

0.6

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

60.215

99.643

0.6

  dprA/cilB/dalA Streptococcus pneumoniae D39

60.215

99.643

0.6

  dprA/cilB/dalA Streptococcus pneumoniae R6

60.215

99.643

0.6

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

60.215

99.643

0.6

  dprA/cilB/dalA Streptococcus mitis NCTC 12261

59.857

99.643

0.596

  dprA Lactococcus lactis subsp. cremoris KW2

56.835

99.286

0.564

  dprA Legionella pneumophila strain ERS1305867

42.917

85.714

0.368

  dprA Haemophilus influenzae Rd KW20

37.828

95.357

0.361

  dprA Acinetobacter baumannii D1279779

37.828

95.357

0.361


Multiple sequence alignment