Detailed information NTG0339955

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: F3K22_RS13965
• Genome accession: NZ_CP043958
• Coordinates: 3300560..3301171 (-)
• Length: 203 a.a.
• NCBI ID: WP_037729632.1
• Uniprot ID: -
• Organism: Streptomyces sp. LBUM 1475
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3295560..3306171

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F3K22_RS13945 (F3K22_14090)	-	3296680..3297636 (+)	957	WP_210534234.1	hypothetical protein	-
F3K22_RS13950 (F3K22_14095)	-	3297786..3298070 (-)	285	WP_210524598.1	hypothetical protein	-
F3K22_RS13955 (F3K22_14100)	clpX	3298307..3299593 (-)	1287	WP_013003579.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
F3K22_RS13960 (F3K22_14105)	clpP	3299797..3300477 (-)	681	WP_013003578.1	ATP-dependent Clp protease proteolytic subunit	Regulator
F3K22_RS13965 (F3K22_14110)	clpP	3300560..3301171 (-)	612	WP_037729632.1	ATP-dependent Clp protease proteolytic subunit	Regulator
F3K22_RS13970 (F3K22_14115)	tig	3301575..3302975 (-)	1401	WP_013003576.1	trigger factor	-
F3K22_RS13985 (F3K22_14130)	-	3303623..3303817 (-)	195	WP_033526477.1	hypothetical protein	-
F3K22_RS13990 (F3K22_14135)	-	3304394..3305596 (+)	1203	WP_037729631.1	acyltransferase family protein	-
F3K22_RS13995 (F3K22_14140)	-	3305675..3306160 (-)	486	WP_037729630.1	HD domain-containing protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 21470.34 Da
• Isoelectric Point: 4.6747

>NTDB_id=339955 F3K22_RS13965 WP_037729632.1 3300560..3301171(-) (clpP) [Streptomyces sp. LBUM 1475]
MPSAAGEPSIGGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLAADPDKDIYLYINSPGGSITAGMAIYDTMQF
IKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTVE
QVTRDSDRDRWFDAFEAKEYGLIDDVIPTAAGMPGGGGTGAGQ

Nucleotide

• Length: 612 bp

>NTDB_id=339955 F3K22_RS13965 WP_037729632.1 3300560..3301171(-) (clpP) [Streptomyces sp. LBUM 1475]
ATGCCCTCAGCCGCCGGCGAGCCTTCCATCGGTGGTGGCCTCGGCGACCAGGTCTACAACCGGCTGCTCAACGAGCGGAT
CATCTTCCTCGGCCAGCCGGTCGACGACGACATTGCCAACAAGATCACCGCACAGCTGCTGCTCCTTGCCGCGGACCCCG
ACAAGGACATCTACCTCTACATCAACAGCCCCGGCGGCTCCATCACGGCCGGTATGGCGATCTACGACACGATGCAGTTC
ATCAAGAACGACGTCGTGACCATCGCCATGGGCCTCGCGGCCTCGATGGGCCAGTTCCTGCTGAGCGCGGGCACCCCCGG
CAAGCGCTTCGCGCTGCCGAACGCCGAGATCCTGATCCACCAGCCCTCGGCCGGTCTGGCCGGTTCGGCGTCGGACATCA
AGATCCACGCCGAGCGGCTGCTGCACACCAAGAAGCGCATGGCGGAGCTCACCTCCCAGCACACGGGTCAGACCGTCGAG
CAGGTGACCCGTGACTCGGACCGTGACCGCTGGTTCGACGCCTTCGAGGCCAAGGAGTACGGCCTCATCGACGACGTGAT
CCCCACGGCCGCCGGCATGCCGGGCGGCGGCGGCACCGGGGCCGGGCAGTAG

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (16-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	58.48	84.236	0.493
clpP	Lactococcus lactis subsp. cremoris KW2	53.261	90.64	0.483
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	52.973	91.133	0.483
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	52.717	90.64	0.478
clpP	Streptococcus mutans UA159	55.491	85.222	0.473
clpP	Streptococcus pyogenes MGAS315	52.601	85.222	0.448
clpP	Streptococcus pyogenes JRS4	52.601	85.222	0.448
clpP	Streptococcus thermophilus LMG 18311	52.601	85.222	0.448
clpP	Streptococcus thermophilus LMD-9	52.601	85.222	0.448
clpP	Streptococcus pneumoniae Rx1	52.023	85.222	0.443
clpP	Streptococcus pneumoniae D39	52.023	85.222	0.443
clpP	Streptococcus pneumoniae R6	52.023	85.222	0.443
clpP	Streptococcus pneumoniae TIGR4	52.023	85.222	0.443