Detailed information NTG0338339

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH20_RS09130
• Genome accession: NZ_CP035260
• Coordinates: 1792253..1792657 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901925
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1787253..1797657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH20_RS09095 (EQH20_09595)	rnpA	1787668..1788039 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH20_RS10235	-	1788056..1788187 (-)	132	WP_000768904.1	hypothetical protein	-
EQH20_RS09100 (EQH20_09600)	-	1788188..1789378 (-)	1191	WP_000167766.1	acetate kinase	-
EQH20_RS09105 (EQH20_09605)	comYH	1789429..1790382 (-)	954	WP_000345130.1	class I SAM-dependent methyltransferase	Machinery gene
EQH20_RS09110 (EQH20_09610)	-	1790443..1791037 (-)	595	Protein_1784	class I SAM-dependent methyltransferase	-
EQH20_RS09115 (EQH20_09615)	comGG/cglG	1791140..1791586 (-)	447	WP_061647526.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH20_RS09120 (EQH20_09620)	comGF/cglF	1791564..1792025 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH20_RS09125 (EQH20_09625)	comGE/cglE	1791988..1792290 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH20_RS09130 (EQH20_09630)	comGD/cglD	1792253..1792657 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH20_RS09135 (EQH20_09635)	comGC/cglC	1792650..1792976 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
EQH20_RS09140 (EQH20_09640)	comGB/cglB	1792978..1793994 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH20_RS09145 (EQH20_09645)	comGA/cglA/cilD	1793942..1794883 (-)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH20_RS09150 (EQH20_09650)	-	1794959..1795324 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH20_RS09155 (EQH20_09655)	-	1795475..1796533 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=338339 EQH20_RS09130 WP_000588030.1 1792253..1792657(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901925]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=338339 EQH20_RS09130 WP_000588030.1 1792253..1792657(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901925]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463