Detailed information NTG0336700

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH45_RS09935
• Genome accession: NZ_CP035235
• Coordinates: 1938053..1938457 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902276
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1933053..1943457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH45_RS09900 (EQH45_10425)	rnpA	1933468..1933839 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH45_RS11110	-	1933856..1933987 (-)	132	WP_000768904.1	hypothetical protein	-
EQH45_RS09905 (EQH45_10430)	-	1933988..1935178 (-)	1191	WP_000167768.1	acetate kinase	-
EQH45_RS09910 (EQH45_10435)	comYH	1935229..1936182 (-)	954	WP_000345086.1	class I SAM-dependent methyltransferase	Machinery gene
EQH45_RS09915 (EQH45_10440)	-	1936243..1936837 (-)	595	Protein_1955	class I SAM-dependent methyltransferase	-
EQH45_RS09920 (EQH45_10445)	comGG/cglG	1936940..1937386 (-)	447	WP_001811371.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH45_RS09925 (EQH45_10450)	comGF/cglF	1937364..1937825 (-)	462	WP_000250523.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH45_RS09930 (EQH45_10455)	comGE/cglE	1937788..1938090 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH45_RS09935 (EQH45_10460)	comGD/cglD	1938053..1938457 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH45_RS09940 (EQH45_10465)	comGC/cglC	1938450..1938776 (-)	327	WP_000738621.1	comG operon protein ComGC	Machinery gene
EQH45_RS09945 (EQH45_10470)	comGB/cglB	1938778..1939794 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH45_RS09950 (EQH45_10475)	comGA/cglA/cilD	1939742..1940683 (-)	942	WP_000249568.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH45_RS09955 (EQH45_10480)	-	1940759..1941124 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH45_RS09960 (EQH45_10485)	-	1941275..1942333 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=336700 EQH45_RS09935 WP_000588023.1 1938053..1938457(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1902276]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=336700 EQH45_RS09935 WP_000588023.1 1938053..1938457(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1902276]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCGGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47