Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | EQH45_RS09930 | Genome accession | NZ_CP035235 |
| Coordinates | 1937788..1938090 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413380.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1902276 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1932788..1943090
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH45_RS09900 (EQH45_10425) | rnpA | 1933468..1933839 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| EQH45_RS11110 | - | 1933856..1933987 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| EQH45_RS09905 (EQH45_10430) | - | 1933988..1935178 (-) | 1191 | WP_000167768.1 | acetate kinase | - |
| EQH45_RS09910 (EQH45_10435) | comYH | 1935229..1936182 (-) | 954 | WP_000345086.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EQH45_RS09915 (EQH45_10440) | - | 1936243..1936837 (-) | 595 | Protein_1955 | class I SAM-dependent methyltransferase | - |
| EQH45_RS09920 (EQH45_10445) | comGG/cglG | 1936940..1937386 (-) | 447 | WP_001811371.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EQH45_RS09925 (EQH45_10450) | comGF/cglF | 1937364..1937825 (-) | 462 | WP_000250523.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EQH45_RS09930 (EQH45_10455) | comGE/cglE | 1937788..1938090 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EQH45_RS09935 (EQH45_10460) | comGD/cglD | 1938053..1938457 (-) | 405 | WP_000588023.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQH45_RS09940 (EQH45_10465) | comGC/cglC | 1938450..1938776 (-) | 327 | WP_000738621.1 | comG operon protein ComGC | Machinery gene |
| EQH45_RS09945 (EQH45_10470) | comGB/cglB | 1938778..1939794 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EQH45_RS09950 (EQH45_10475) | comGA/cglA/cilD | 1939742..1940683 (-) | 942 | WP_000249568.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EQH45_RS09955 (EQH45_10480) | - | 1940759..1941124 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| EQH45_RS09960 (EQH45_10485) | - | 1941275..1942333 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11135.11 Da Isoelectric Point: 9.7273
>NTDB_id=336699 EQH45_RS09930 WP_000413380.1 1937788..1938090(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1902276]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVNINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=336699 EQH45_RS09930 WP_000413380.1 1937788..1938090(-) (comGE/cglE) [Streptococcus pneumoniae strain TVO_1902276]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACAGGTCAAAATCAGGTAAACATAAACGGAGTTGAGATTCAGGTGTTTTCT
AGCGAAAAGGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus mitis NCTC 12261 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae D39 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae R6 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
99 |
100 |
0.99 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
43.333 |
90 |
0.39 |
| comYE | Streptococcus mutans UA159 |
43.333 |
90 |
0.39 |