Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   EO946_RS08990 Genome accession   NZ_CP034943
Coordinates   1731096..1732346 (+) Length   416 a.a.
NCBI ID   WP_003221005.1    Uniprot ID   E0TV16
Organism   Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1726096..1737346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EO946_RS08960 (EO946_08960) yfmH 1726187..1727473 (+) 1287 WP_003220993.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  EO946_RS08965 (EO946_08965) ymfI 1727526..1728254 (+) 729 WP_003220995.1 elongation factor P 5-aminopentanone reductase -
  EO946_RS08970 (EO946_08970) - 1728335..1728592 (+) 258 WP_003220996.1 DUF3243 domain-containing protein -
  EO946_RS08975 (EO946_08975) - 1728722..1729513 (+) 792 WP_003220998.1 YmfK family protein -
  EO946_RS08980 (EO946_08980) rodZ 1729580..1730446 (+) 867 WP_202892724.1 cell shape determination protein RodZ -
  EO946_RS08985 (EO946_08985) pgsA 1730497..1731078 (+) 582 WP_003221002.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  EO946_RS08990 (EO946_08990) cinA 1731096..1732346 (+) 1251 WP_003221005.1 competence/damage-inducible protein A Machinery gene
  EO946_RS08995 (EO946_08995) recA 1732519..1733565 (+) 1047 WP_003221008.1 recombinase RecA Machinery gene
  EO946_RS09000 (EO946_09000) - 1733735..1734910 (+) 1176 WP_003221009.1 serine hydrolase -
  EO946_RS09005 (EO946_09005) rny 1735186..1736748 (+) 1563 WP_003221010.1 ribonuclease Y -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45541.88 Da        Isoelectric Point: 5.3857

>NTDB_id=333578 EO946_RS08990 WP_003221005.1 1731096..1732346(+) (cinA) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MEFPKKAEIIAVGSELLLGQIANTNAQFISKQLAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDFIIFSGGLGPTKDDL
TKETIANALGRPLVLNEEAFQSIEDYFKRTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLTEHESRFYMLLPGPPSEL
RPMFENEAKPLLLKKMGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAVILERVGEFFYGYDDTSLVKELSKACKEKGLTISAAESFTGGLFSEWLTDLSGASKRFAGGVVCYTNDVKQNVLG
VKKETLDQFGAVSKECASELAKGVQKLTGSDIGISFTGVAGPDTQEGHEPGHVFIGISANGKEEVHEFHFAGSRTGIRKR
GAKYGCHLILKLLEQK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=333578 EO946_RS08990 WP_003221005.1 1731096..1732346(+) (cinA) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
ATGGAATTTCCAAAAAAAGCAGAAATTATTGCAGTCGGTTCAGAGCTGCTGCTTGGCCAGATCGCTAATACAAATGCTCA
ATTTATCAGCAAACAGCTCGCTGAAATCGGGGTGAACGTATTTTATCATACAGCAGTCGGAGATAACCCGGAGCGGCTGA
AGCAGGTCATCCGCATTGCTGAAGAACGTTCTGACTTCATTATCTTTTCAGGAGGTCTCGGACCGACAAAAGATGATTTG
ACGAAAGAAACGATTGCAAATGCGCTGGGACGTCCGCTTGTGTTAAATGAAGAGGCGTTCCAATCCATTGAGGACTATTT
CAAACGAACAAAACGCACGATGTCACCTAATAACCGAAAACAGGCGCTTGTGATCGAAGGATCTGACGTACTGGCAAATC
ACTTTGGAATGGCACCGGGAATGCTCACAGAGCATGAATCGCGCTTTTATATGCTTCTTCCTGGGCCGCCAAGCGAATTG
CGTCCCATGTTTGAAAACGAGGCAAAGCCTCTTCTGCTGAAAAAAATGGGTTCAAATGAAAAAATTGTGTCAACCGTTCT
TCGCTTTTTCGGTATCGGTGAATCTCAGCTTGAAGCCGATTTGGAAGATATTATTGATGCACAAACCAACCCGACAATCG
CTCCATTGGCGGCAGATGGAGAGGTGACGCTGCGTCTGACAGCCAAGCATGCTGACGAAAAGGAAACAGAGCGTCTGTTA
AAAGAAACAGAGGCTGTTATTTTAGAACGTGTCGGTGAATTTTTCTATGGTTACGATGATACTTCCCTTGTAAAAGAGCT
TTCTAAAGCATGTAAGGAAAAAGGCCTTACGATTTCCGCGGCGGAAAGCTTTACCGGCGGGCTGTTTTCTGAATGGCTGA
CGGATCTTAGCGGTGCTTCAAAACGATTTGCCGGCGGCGTTGTTTGCTATACAAACGACGTGAAACAGAATGTGCTTGGC
GTCAAGAAGGAGACATTAGATCAATTTGGCGCGGTCAGCAAGGAGTGCGCATCAGAGCTGGCAAAGGGTGTTCAAAAGCT
CACTGGCAGCGACATCGGCATCAGCTTTACCGGTGTAGCAGGACCTGATACTCAAGAAGGGCATGAGCCTGGACATGTGT
TTATCGGTATTTCAGCAAATGGAAAAGAAGAGGTTCACGAGTTTCACTTTGCGGGTTCCAGAACGGGAATCAGAAAACGC
GGTGCTAAATACGGCTGTCATTTAATCTTGAAGCTTTTAGAGCAAAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(261-412)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)

Damage-inducible protein CinA KH domain (CinA_KH)

(184-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0TV16

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

97.837

100

0.978
  cinA Streptococcus mitis NCTC 12261

45.694

100

0.459
  cinA Streptococcus mitis SK321

45.694

100

0.459
  cinA Streptococcus pneumoniae TIGR4

45.455

100

0.457
  cinA Streptococcus mutans UA159

46.005

99.279

0.457
  cinA Streptococcus pneumoniae Rx1

45.215

100

0.454
  cinA Streptococcus pneumoniae R6

45.215

100

0.454
  cinA Streptococcus pneumoniae D39

44.976

100

0.452
  cinA Streptococcus suis isolate S10

41.645

90.625

0.377

Multiple sequence alignment