Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   EHW89_RS09350 Genome accession   NZ_CP034543
Coordinates   1901575..1902765 (+) Length   396 a.a.
NCBI ID   WP_003032033.1    Uniprot ID   I0S836
Organism   Streptococcus periodonticum strain KCOM 2412     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1896575..1907765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHW89_RS09325 (EHW89_09325) comE 1898386..1899135 (-) 750 WP_126468011.1 competence system response regulator transcription factor ComE Regulator
  EHW89_RS09330 (EHW89_09330) comD/comD2 1899135..1900457 (-) 1323 WP_126468013.1 sensor histidine kinase Regulator
  EHW89_RS09335 (EHW89_09335) - 1900472..1900621 (-) 150 WP_106388355.1 bacteriocin -
  EHW89_RS09345 (EHW89_09345) rlmH 1900903..1901382 (-) 480 WP_126468015.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EHW89_RS09350 (EHW89_09350) htrA 1901575..1902765 (+) 1191 WP_003032033.1 S1C family serine protease Regulator
  EHW89_RS09355 (EHW89_09355) spo0J 1902820..1903587 (+) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41651.61 Da        Isoelectric Point: 9.4264

>NTDB_id=331807 EHW89_RS09350 WP_003032033.1 1901575..1902765(+) (htrA) [Streptococcus periodonticum strain KCOM 2412]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTNSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLEANGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRDGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=331807 EHW89_RS09350 WP_003032033.1 1901575..1902765(+) (htrA) [Streptococcus periodonticum strain KCOM 2412]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCTATAGGTTTTATCGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAAATAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTGAAAGATGCTGTGGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAACAGCGTGTTTGGAAATGATGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGGGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACTCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGCATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGTAAATTGACGGTTGGTGAGACAGCTATTGCGATTGGAAG
TCCGCTCGGATCAAATTACGCTAACACTGTGACGCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTTTAAAATCTG
AAGACGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATTAACCCAGGGAACTCTGGTGGACCACTTGTG
AATATCCAAGGACAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAGTTAGAAGCAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTACGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCCGCTTTATACAAACATTCAATTGGTGACAACATAAAAATCACTTTCTATC
GTGATGGAAAAGAAACTACTACTACCATTAAGCTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0S836

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.561

100

0.765

  htrA Streptococcus mitis NCTC 12261

72.544

100

0.727

  htrA Streptococcus pneumoniae Rx1

72.292

100

0.725

  htrA Streptococcus pneumoniae D39

72.292

100

0.725

  htrA Streptococcus pneumoniae R6

72.292

100

0.725

  htrA Streptococcus pneumoniae TIGR4

72.292

100

0.725

  htrA Streptococcus mutans UA159

55.471

99.242

0.551


Multiple sequence alignment