Detailed information NTG0331384

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: EJF26_RS08445
• Genome accession: NZ_CP034442
• Coordinates: 1652231..1652692 (+)
• Length: 153 a.a.
• NCBI ID: WP_000250704.1
• Uniprot ID: -
• Organism: Streptococcus oralis subsp. dentisani strain F0392
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1647231..1657692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJF26_RS08410	nagA	1647647..1648798 (+)	1152	WP_001134436.1	N-acetylglucosamine-6-phosphate deacetylase	-
EJF26_RS08415	-	1648947..1649312 (+)	366	WP_000286403.1	DUF1033 family protein	-
EJF26_RS08420	comGA/cglA/cilD	1649376..1650317 (+)	942	WP_000249589.1	competence type IV pilus ATPase ComGA	Machinery gene
EJF26_RS08425	comGB/cglB	1650265..1651281 (+)	1017	WP_000355376.1	competence type IV pilus assembly protein ComGB	Machinery gene
EJF26_RS08430	comGC/cglC	1651283..1651606 (+)	324	WP_000735797.1	competence type IV pilus major pilin ComGC	Machinery gene
EJF26_RS08435	comGD/cglD	1651569..1652003 (+)	435	WP_001180063.1	competence type IV pilus minor pilin ComGD	Machinery gene
EJF26_RS08440	comGE/cglE	1651966..1652268 (+)	303	WP_000413366.1	competence type IV pilus minor pilin ComGE	Machinery gene
EJF26_RS08445	comGF/cglF	1652231..1652692 (+)	462	WP_000250704.1	competence type IV pilus minor pilin ComGF	Machinery gene
EJF26_RS08450	comGG/cglG	1652670..1653083 (+)	414	WP_000265655.1	competence type IV pilus minor pilin ComGG	Machinery gene
EJF26_RS08455	-	1653116..1653706 (+)	591	WP_000679780.1	class I SAM-dependent methyltransferase	-
EJF26_RS08460	comYH	1653764..1654717 (+)	954	WP_000345148.1	class I SAM-dependent methyltransferase	Machinery gene
EJF26_RS08465	-	1654767..1655957 (+)	1191	WP_000167801.1	acetate kinase	-
EJF26_RS08470	rnpA	1656117..1656488 (+)	372	WP_000748123.1	ribonuclease P protein component	-
EJF26_RS08475	-	1656463..1657275 (+)	813	WP_000728094.1	YidC/Oxa1 family membrane protein insertase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17788.47 Da
• Isoelectric Point: 9.3254

>NTDB_id=331384 EJF26_RS08445 WP_000250704.1 1652231..1652692(+) (comGF/cglF) [Streptococcus oralis subsp. dentisani strain F0392]
MVQRNCSTLKSGKVRAFTLLESLVALIVISGSLLLFQAMSQLLISEVRYQQQSEQKEWLLFVEQLEAELERSQFEKVEGN
RIYMKQDGKEIAVGKSKLDDFRKTDSSGRGYQPMVYGLKSAQITEENHLVRFHFQFQKGLEREFIYRVEKAKS

Nucleotide

• Length: 462 bp

>NTDB_id=331384 EJF26_RS08445 WP_000250704.1 1652231..1652692(+) (comGF/cglF) [Streptococcus oralis subsp. dentisani strain F0392]
ATGGTTCAGAGAAATTGCTCGACCTTAAAGAGCGGTAAGGTAAGAGCATTCACTCTTTTAGAATCTCTGGTTGCCCTTAT
CGTCATTAGCGGTAGCTTGCTCCTCTTTCAAGCCATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGAACAGCTGGAGGCGGAGTTAGAGCGTTCGCAGTTCGAAAAGGTGGAAGGCAAT
CGTATTTATATGAAGCAGGATGGCAAGGAAATTGCGGTAGGCAAGTCTAAATTAGATGATTTTCGGAAGACCGATAGCAG
TGGCCGGGGCTATCAGCCTATGGTTTATGGATTGAAATCAGCACAAATCACAGAGGAAAATCACTTGGTTCGCTTTCATT
TCCAATTTCAAAAGGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGCAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	88.235	100	0.882
comGF/cglF	Streptococcus mitis SK321	86.928	100	0.869
comGF/cglF	Streptococcus pneumoniae Rx1	84.314	100	0.843
comGF/cglF	Streptococcus pneumoniae D39	84.314	100	0.843
comGF/cglF	Streptococcus pneumoniae R6	84.314	100	0.843
comGF/cglF	Streptococcus pneumoniae TIGR4	84.314	100	0.843
comGF	Lactococcus lactis subsp. cremoris KW2	42.143	91.503	0.386
comYF	Streptococcus mutans UA159	41.304	90.196	0.373
comYF	Streptococcus mutans UA140	41.304	90.196	0.373