Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | EH197_RS01360 | Genome accession | NZ_CP034169 |
| Coordinates | 174423..175670 (+) | Length | 415 a.a. |
| NCBI ID | WP_048719424.1 | Uniprot ID | A0A2N8PZS0 |
| Organism | Enterococcus avium strain 352 | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 175795..240770 | 174423..175670 | flank | 125 |
Gene organization within MGE regions
Location: 174423..240770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EH197_RS01360 (EH197_01365) | cinA | 174423..175670 (+) | 1248 | WP_048719424.1 | competence/damage-inducible protein A | Machinery gene |
| EH197_RS01365 (EH197_01370) | recA | 175795..176844 (+) | 1050 | WP_016179435.1 | recombinase RecA | Machinery gene |
| EH197_RS01370 (EH197_01375) | rny | 177098..178654 (+) | 1557 | WP_137438883.1 | ribonuclease Y | - |
| EH197_RS01375 (EH197_01380) | - | 178734..179876 (-) | 1143 | WP_208759884.1 | site-specific integrase | - |
| EH197_RS01380 (EH197_01385) | - | 179901..180215 (-) | 315 | WP_070621750.1 | hypothetical protein | - |
| EH197_RS01385 (EH197_01390) | - | 180285..180713 (-) | 429 | WP_028020939.1 | ImmA/IrrE family metallo-endopeptidase | - |
| EH197_RS01390 (EH197_01395) | - | 180729..181142 (-) | 414 | WP_028020938.1 | helix-turn-helix transcriptional regulator | - |
| EH197_RS01395 (EH197_01400) | - | 181379..181582 (+) | 204 | WP_035019754.1 | helix-turn-helix transcriptional regulator | - |
| EH197_RS01400 (EH197_01405) | - | 181585..181890 (+) | 306 | WP_137438884.1 | hypothetical protein | - |
| EH197_RS01405 (EH197_01410) | - | 182028..183278 (-) | 1251 | WP_137438885.1 | IS110 family transposase | - |
| EH197_RS01410 (EH197_01415) | - | 183685..183867 (+) | 183 | WP_118368284.1 | hypothetical protein | - |
| EH197_RS01415 (EH197_01420) | - | 183860..184099 (-) | 240 | WP_118368283.1 | hypothetical protein | - |
| EH197_RS24970 | - | 184163..184294 (+) | 132 | WP_259322450.1 | hypothetical protein | - |
| EH197_RS01420 (EH197_01425) | - | 184320..184544 (-) | 225 | WP_118368282.1 | hypothetical protein | - |
| EH197_RS01425 (EH197_01430) | - | 184597..185310 (+) | 714 | WP_118368281.1 | Rha family transcriptional regulator | - |
| EH197_RS01430 (EH197_01435) | - | 185326..185526 (+) | 201 | WP_118368280.1 | hypothetical protein | - |
| EH197_RS01435 (EH197_01440) | - | 185547..185810 (+) | 264 | WP_070509291.1 | hypothetical protein | - |
| EH197_RS01440 (EH197_01445) | - | 185800..186009 (-) | 210 | WP_070509295.1 | hypothetical protein | - |
| EH197_RS01445 (EH197_01450) | - | 186087..186278 (+) | 192 | WP_102865896.1 | hypothetical protein | - |
| EH197_RS01450 (EH197_01455) | - | 186344..186757 (+) | 414 | WP_118368279.1 | hypothetical protein | - |
| EH197_RS01455 (EH197_01460) | - | 186770..187513 (+) | 744 | WP_070509299.1 | hypothetical protein | - |
| EH197_RS01460 (EH197_01465) | - | 187587..187916 (+) | 330 | WP_048720578.1 | hypothetical protein | - |
| EH197_RS01465 (EH197_01470) | - | 188022..188963 (+) | 942 | WP_048720576.1 | YqaJ viral recombinase family protein | - |
| EH197_RS01470 (EH197_01475) | - | 188965..189813 (+) | 849 | WP_048720574.1 | recombinase RecT | - |
| EH197_RS01475 (EH197_01480) | - | 189853..190791 (+) | 939 | WP_048720572.1 | Lin1244/Lin1753 domain-containing protein | - |
| EH197_RS01480 (EH197_01485) | - | 190796..191080 (+) | 285 | WP_028020901.1 | hypothetical protein | - |
| EH197_RS01485 (EH197_01490) | - | 191077..191433 (+) | 357 | WP_010743600.1 | hypothetical protein | - |
| EH197_RS01490 (EH197_01495) | - | 191433..191743 (+) | 311 | Protein_204 | MazG-like family protein | - |
| EH197_RS01495 (EH197_01500) | - | 191790..192068 (+) | 279 | WP_048720570.1 | hypothetical protein | - |
| EH197_RS01500 (EH197_01505) | - | 192115..192558 (-) | 444 | WP_010746224.1 | hypothetical protein | - |
| EH197_RS01505 (EH197_01510) | - | 192551..192808 (-) | 258 | WP_010746225.1 | hypothetical protein | - |
| EH197_RS24575 | - | 192823..193200 (-) | 378 | WP_070558082.1 | hypothetical protein | - |
| EH197_RS01515 (EH197_01520) | - | 193346..193813 (+) | 468 | WP_118368346.1 | hypothetical protein | - |
| EH197_RS01520 (EH197_01525) | - | 193837..194067 (+) | 231 | WP_118368345.1 | hypothetical protein | - |
| EH197_RS01525 (EH197_01530) | - | 194064..194402 (+) | 339 | WP_028020878.1 | hypothetical protein | - |
| EH197_RS01530 (EH197_01535) | - | 194443..194625 (+) | 183 | WP_070504224.1 | hypothetical protein | - |
| EH197_RS01535 (EH197_01540) | - | 194656..195606 (+) | 951 | WP_070509400.1 | site-specific integrase | - |
| EH197_RS01540 (EH197_01545) | - | 195621..196148 (+) | 528 | WP_028020911.1 | hypothetical protein | - |
| EH197_RS01545 (EH197_01550) | - | 196123..196716 (+) | 594 | WP_028020912.1 | N-6 DNA methylase | - |
| EH197_RS01550 (EH197_01555) | - | 196790..197275 (+) | 486 | WP_118368342.1 | hypothetical protein | - |
| EH197_RS01555 (EH197_01560) | - | 197285..197464 (+) | 180 | WP_118368341.1 | hypothetical protein | - |
| EH197_RS24370 | - | 197461..197628 (+) | 168 | WP_167494423.1 | hypothetical protein | - |
| EH197_RS24255 | - | 197625..197798 (+) | 174 | WP_158408716.1 | hypothetical protein | - |
| EH197_RS01560 (EH197_01565) | - | 198810..199289 (+) | 480 | WP_028020438.1 | hypothetical protein | - |
| EH197_RS24680 | - | 199865..199951 (+) | 87 | WP_220427427.1 | putative holin-like toxin | - |
| EH197_RS01565 (EH197_01570) | - | 200539..200796 (+) | 258 | WP_070503332.1 | hypothetical protein | - |
| EH197_RS01570 (EH197_01575) | terS | 200822..201691 (+) | 870 | WP_028020437.1 | phage terminase small subunit | - |
| EH197_RS01575 (EH197_01580) | - | 201672..202967 (+) | 1296 | WP_083284938.1 | PBSX family phage terminase large subunit | - |
| EH197_RS01580 (EH197_01585) | - | 202984..204402 (+) | 1419 | WP_028020435.1 | phage portal protein | - |
| EH197_RS01585 (EH197_01590) | - | 204374..204850 (+) | 477 | WP_010743592.1 | ribosomal-processing cysteine protease Prp | - |
| EH197_RS01590 (EH197_01595) | - | 204831..206069 (+) | 1239 | WP_010743591.1 | minor capsid protein | - |
| EH197_RS01595 (EH197_01600) | - | 206213..206869 (+) | 657 | WP_010743590.1 | DUF4355 domain-containing protein | - |
| EH197_RS01600 (EH197_01605) | - | 206887..207921 (+) | 1035 | WP_010743589.1 | major capsid protein | - |
| EH197_RS01605 (EH197_01610) | - | 207937..208284 (+) | 348 | WP_010743588.1 | phage head-tail connector protein | - |
| EH197_RS01610 (EH197_01615) | - | 208265..208618 (+) | 354 | WP_010743587.1 | hypothetical protein | - |
| EH197_RS01615 (EH197_01620) | - | 208608..209147 (+) | 540 | WP_028020433.1 | hypothetical protein | - |
| EH197_RS01620 (EH197_01625) | - | 209144..209509 (+) | 366 | WP_010743585.1 | hypothetical protein | - |
| EH197_RS01625 (EH197_01630) | - | 209525..209962 (+) | 438 | WP_010743584.1 | phage tail tube protein | - |
| EH197_RS01630 (EH197_01635) | - | 210034..210405 (+) | 372 | WP_028020432.1 | DUF6096 family protein | - |
| EH197_RS01635 (EH197_01640) | - | 210438..210785 (+) | 348 | WP_010743582.1 | hypothetical protein | - |
| EH197_RS01640 (EH197_01645) | - | 210789..215429 (+) | 4641 | WP_137438886.1 | hypothetical protein | - |
| EH197_RS01645 (EH197_01650) | - | 215442..215801 (+) | 360 | WP_010743580.1 | DUF6711 family protein | - |
| EH197_RS01650 (EH197_01655) | - | 215810..218278 (+) | 2469 | WP_010743579.1 | hypothetical protein | - |
| EH197_RS24975 | - | 218275..218400 (+) | 126 | WP_010743578.1 | hypothetical protein | - |
| EH197_RS01655 (EH197_01660) | - | 218532..219782 (-) | 1251 | WP_002346915.1 | IS110 family transposase | - |
| EH197_RS01660 (EH197_01665) | - | 220178..221212 (+) | 1035 | WP_010743577.1 | hypothetical protein | - |
| EH197_RS01665 (EH197_01670) | - | 221283..221621 (+) | 339 | WP_010743576.1 | hypothetical protein | - |
| EH197_RS01670 (EH197_01675) | - | 221624..221893 (+) | 270 | WP_010743575.1 | phage holin family protein | - |
| EH197_RS01675 (EH197_01680) | - | 222011..223024 (+) | 1014 | WP_070505065.1 | peptidoglycan amidohydrolase family protein | - |
| EH197_RS01685 (EH197_01690) | bsh | 223493..224467 (+) | 975 | WP_010743572.1 | choloylglycine hydrolase | - |
| EH197_RS01690 (EH197_01695) | - | 225050..226390 (-) | 1341 | WP_137438887.1 | ISL3 family transposase | - |
| EH197_RS01695 (EH197_01700) | - | 226694..227380 (+) | 687 | WP_010743569.1 | hypothetical protein | - |
| EH197_RS01700 (EH197_01705) | - | 227491..228746 (+) | 1256 | Protein_249 | IS256 family transposase | - |
| EH197_RS01705 (EH197_01710) | - | 229152..229406 (-) | 255 | WP_010743567.1 | hypothetical protein | - |
| EH197_RS01710 (EH197_01715) | - | 229796..230692 (+) | 897 | WP_016178335.1 | permease | - |
| EH197_RS01715 (EH197_01720) | - | 230708..231547 (+) | 840 | WP_016178336.1 | TIGR03943 family protein | - |
| EH197_RS01720 (EH197_01725) | - | 231731..232408 (+) | 678 | WP_016178337.1 | response regulator transcription factor | - |
| EH197_RS01725 (EH197_01730) | - | 232408..233397 (+) | 990 | WP_070503953.1 | sensor histidine kinase | - |
| EH197_RS01730 (EH197_01735) | - | 233538..234299 (+) | 762 | WP_048720073.1 | ABC transporter ATP-binding protein | - |
| EH197_RS01735 (EH197_01740) | - | 234302..236290 (+) | 1989 | WP_016178340.1 | FtsX-like permease family protein | - |
| EH197_RS01740 (EH197_01745) | - | 236515..237675 (-) | 1161 | WP_016178341.1 | cation diffusion facilitator family transporter | - |
| EH197_RS01745 (EH197_01750) | - | 237908..238261 (+) | 354 | WP_016178342.1 | hypothetical protein | - |
| EH197_RS24685 | - | 238824..239618 (+) | 795 | WP_244299387.1 | hypothetical protein | - |
| EH197_RS24980 | - | 239631..239867 (+) | 237 | Protein_260 | NlpC/P60 family protein | - |
| EH197_RS24695 | - | 239877..240770 (+) | 894 | WP_338324094.1 | glucosaminidase domain-containing protein | - |
Sequence
Protein
Download Length: 415 a.a. Molecular weight: 45284.81 Da Isoelectric Point: 4.5647
>NTDB_id=329513 EH197_RS01360 WP_048719424.1 174423..175670(+) (cinA) [Enterococcus avium strain 352]
MKAEIIAVGTELLLGQVVNTNATFLSEKLADMGIEVYYHTVVGDNPQRLEELLQLADTRSELIILCGGLGPTDDDLTKNV
LAEHVGVPLVQNQAGLEALNSFFIQRQSTMTPNNLRQIETLQDGIPLPNRTGLAIGCLYKGKKNNYILLPGPPSELKPMF
LEQARPLLEKEFPTTEKLTSRVLRFFGIGESKLVTDLAEMITHQSNPTIAPYAKPNEVTLRITAKTEDEISANALLNQTE
AEIMAKVGEFFYGYGEENSLVEVVVNLLKEKQLSITAAESLTAGEFQATLGTIPGVSEVFPGGFVTYSETTKASFLGINP
MLLESVGVVSEECAKEMAEAALRLAETDFALSFTGVAGPDELEGKPKGTVYIALAQKDGETLISENHFTRDRSYVRHSSV
MKGLDMVRRAILNKS
MKAEIIAVGTELLLGQVVNTNATFLSEKLADMGIEVYYHTVVGDNPQRLEELLQLADTRSELIILCGGLGPTDDDLTKNV
LAEHVGVPLVQNQAGLEALNSFFIQRQSTMTPNNLRQIETLQDGIPLPNRTGLAIGCLYKGKKNNYILLPGPPSELKPMF
LEQARPLLEKEFPTTEKLTSRVLRFFGIGESKLVTDLAEMITHQSNPTIAPYAKPNEVTLRITAKTEDEISANALLNQTE
AEIMAKVGEFFYGYGEENSLVEVVVNLLKEKQLSITAAESLTAGEFQATLGTIPGVSEVFPGGFVTYSETTKASFLGINP
MLLESVGVVSEECAKEMAEAALRLAETDFALSFTGVAGPDELEGKPKGTVYIALAQKDGETLISENHFTRDRSYVRHSSV
MKGLDMVRRAILNKS
Nucleotide
Download Length: 1248 bp
>NTDB_id=329513 EH197_RS01360 WP_048719424.1 174423..175670(+) (cinA) [Enterococcus avium strain 352]
ATGAAAGCAGAAATTATTGCCGTGGGCACAGAGCTCTTATTAGGACAAGTCGTGAATACCAATGCAACATTCTTGTCAGA
AAAGTTAGCGGATATGGGAATTGAGGTTTATTATCACACCGTTGTAGGGGATAATCCGCAGCGTTTAGAAGAGTTACTGC
AATTAGCAGATACACGTAGTGAATTGATTATCTTGTGCGGCGGCTTAGGACCAACGGATGACGATTTAACGAAAAATGTT
TTGGCCGAGCACGTCGGAGTGCCATTAGTACAAAATCAAGCAGGATTAGAAGCCCTTAACAGCTTCTTTATCCAACGACA
AAGTACGATGACGCCGAATAATTTACGTCAGATCGAAACATTGCAAGATGGGATTCCGTTACCGAACCGTACTGGCTTAG
CCATTGGTTGTTTATATAAAGGCAAGAAAAACAATTATATCTTATTGCCAGGACCACCAAGCGAATTAAAGCCAATGTTC
TTGGAACAAGCCCGACCATTGTTAGAAAAAGAATTTCCAACAACGGAAAAGCTTACTTCTCGGGTACTGCGTTTCTTCGG
AATCGGAGAATCGAAATTAGTGACCGACTTAGCGGAGATGATTACACACCAGTCTAATCCCACAATCGCACCTTACGCAA
AGCCAAATGAGGTGACTTTGCGTATCACAGCGAAAACAGAGGATGAGATCTCAGCAAATGCTTTATTAAATCAAACAGAA
GCCGAGATCATGGCAAAAGTCGGCGAGTTCTTTTATGGTTATGGAGAAGAGAACAGCTTAGTCGAAGTTGTGGTGAACTT
GCTGAAAGAAAAACAGCTGAGTATCACAGCAGCAGAAAGTTTAACTGCTGGTGAATTTCAAGCGACGTTAGGTACGATTC
CTGGCGTCTCTGAGGTCTTTCCAGGGGGATTTGTCACATATTCCGAGACAACTAAAGCAAGCTTTCTAGGTATCAATCCG
ATGCTGCTAGAAAGTGTCGGCGTGGTGAGTGAAGAATGTGCGAAGGAAATGGCAGAAGCAGCTTTGCGTTTAGCAGAAAC
AGATTTTGCTCTGTCCTTTACCGGAGTGGCGGGTCCTGACGAGCTGGAAGGAAAACCTAAGGGAACGGTTTATATTGCGT
TGGCTCAAAAAGATGGTGAGACGTTGATTAGTGAAAATCATTTTACTCGGGATCGTTCGTATGTCCGCCATAGCTCCGTC
ATGAAGGGCTTAGACATGGTACGGCGAGCAATTCTAAACAAAAGTTAA
ATGAAAGCAGAAATTATTGCCGTGGGCACAGAGCTCTTATTAGGACAAGTCGTGAATACCAATGCAACATTCTTGTCAGA
AAAGTTAGCGGATATGGGAATTGAGGTTTATTATCACACCGTTGTAGGGGATAATCCGCAGCGTTTAGAAGAGTTACTGC
AATTAGCAGATACACGTAGTGAATTGATTATCTTGTGCGGCGGCTTAGGACCAACGGATGACGATTTAACGAAAAATGTT
TTGGCCGAGCACGTCGGAGTGCCATTAGTACAAAATCAAGCAGGATTAGAAGCCCTTAACAGCTTCTTTATCCAACGACA
AAGTACGATGACGCCGAATAATTTACGTCAGATCGAAACATTGCAAGATGGGATTCCGTTACCGAACCGTACTGGCTTAG
CCATTGGTTGTTTATATAAAGGCAAGAAAAACAATTATATCTTATTGCCAGGACCACCAAGCGAATTAAAGCCAATGTTC
TTGGAACAAGCCCGACCATTGTTAGAAAAAGAATTTCCAACAACGGAAAAGCTTACTTCTCGGGTACTGCGTTTCTTCGG
AATCGGAGAATCGAAATTAGTGACCGACTTAGCGGAGATGATTACACACCAGTCTAATCCCACAATCGCACCTTACGCAA
AGCCAAATGAGGTGACTTTGCGTATCACAGCGAAAACAGAGGATGAGATCTCAGCAAATGCTTTATTAAATCAAACAGAA
GCCGAGATCATGGCAAAAGTCGGCGAGTTCTTTTATGGTTATGGAGAAGAGAACAGCTTAGTCGAAGTTGTGGTGAACTT
GCTGAAAGAAAAACAGCTGAGTATCACAGCAGCAGAAAGTTTAACTGCTGGTGAATTTCAAGCGACGTTAGGTACGATTC
CTGGCGTCTCTGAGGTCTTTCCAGGGGGATTTGTCACATATTCCGAGACAACTAAAGCAAGCTTTCTAGGTATCAATCCG
ATGCTGCTAGAAAGTGTCGGCGTGGTGAGTGAAGAATGTGCGAAGGAAATGGCAGAAGCAGCTTTGCGTTTAGCAGAAAC
AGATTTTGCTCTGTCCTTTACCGGAGTGGCGGGTCCTGACGAGCTGGAAGGAAAACCTAAGGGAACGGTTTATATTGCGT
TGGCTCAAAAAGATGGTGAGACGTTGATTAGTGAAAATCATTTTACTCGGGATCGTTCGTATGTCCGCCATAGCTCCGTC
ATGAAGGGCTTAGACATGGTACGGCGAGCAATTCTAAACAAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus pneumoniae TIGR4 |
53.207 |
100 |
0.54 |
| cinA | Streptococcus pneumoniae R6 |
52.969 |
100 |
0.537 |
| cinA | Streptococcus pneumoniae D39 |
52.969 |
100 |
0.537 |
| cinA | Streptococcus pneumoniae Rx1 |
52.969 |
100 |
0.537 |
| cinA | Streptococcus mitis NCTC 12261 |
52.732 |
100 |
0.535 |
| cinA | Streptococcus mitis SK321 |
52.732 |
100 |
0.535 |
| cinA | Streptococcus mutans UA159 |
51.683 |
100 |
0.518 |
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
46.973 |
99.518 |
0.467 |
| cinA | Streptococcus suis isolate S10 |
42.548 |
100 |
0.427 |