Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | EHN06_RS15980 | Genome accession | NZ_CP034142 |
| Coordinates | 3503491..3503760 (+) | Length | 89 a.a. |
| NCBI ID | WP_127333519.1 | Uniprot ID | - |
| Organism | Marinobacter sp. NP-4(2019) | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3498491..3508760
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHN06_RS15970 (EHN06_15970) | uca | 3498542..3502174 (+) | 3633 | WP_127333517.1 | urea carboxylase | - |
| EHN06_RS15975 (EHN06_15975) | - | 3502335..3503057 (+) | 723 | WP_127333518.1 | GntR family transcriptional regulator | - |
| EHN06_RS15980 (EHN06_15980) | comEA | 3503491..3503760 (+) | 270 | WP_127333519.1 | ComEA family DNA-binding protein | Machinery gene |
| EHN06_RS15985 (EHN06_15985) | - | 3503804..3504619 (-) | 816 | WP_127333520.1 | helix-turn-helix domain-containing protein | - |
| EHN06_RS15990 (EHN06_15990) | - | 3504795..3506267 (+) | 1473 | WP_127333521.1 | alanine/glycine:cation symporter family protein | - |
| EHN06_RS15995 (EHN06_15995) | - | 3506264..3507667 (+) | 1404 | WP_127333522.1 | aspartate ammonia-lyase | - |
| EHN06_RS16000 (EHN06_16000) | - | 3507664..3508701 (+) | 1038 | WP_127333523.1 | type I asparaginase | - |
Sequence
Protein
Download Length: 89 a.a. Molecular weight: 9469.79 Da Isoelectric Point: 4.4963
>NTDB_id=329336 EHN06_RS15980 WP_127333519.1 3503491..3503760(+) (comEA) [Marinobacter sp. NP-4(2019)]
MKRTPMIATLVLLFSLLTGFAHAEPAAININTADIETLANLNGIGQSKAEAIVAYREANGPFQSAEELDNVKGIGTVTVE
KNADRLTVE
MKRTPMIATLVLLFSLLTGFAHAEPAAININTADIETLANLNGIGQSKAEAIVAYREANGPFQSAEELDNVKGIGTVTVE
KNADRLTVE
Nucleotide
Download Length: 270 bp
>NTDB_id=329336 EHN06_RS15980 WP_127333519.1 3503491..3503760(+) (comEA) [Marinobacter sp. NP-4(2019)]
ATGAAACGCACCCCGATGATTGCCACACTGGTTCTGCTGTTCAGCCTGCTCACAGGCTTTGCCCACGCCGAACCCGCCGC
AATCAACATCAACACTGCCGATATCGAAACACTGGCCAACCTCAATGGTATTGGCCAAAGCAAGGCAGAAGCCATCGTCG
CTTACCGCGAGGCCAACGGTCCTTTCCAGTCCGCTGAAGAGCTCGACAACGTCAAGGGCATTGGTACAGTTACTGTTGAG
AAAAACGCCGACCGTCTGACGGTCGAATAA
ATGAAACGCACCCCGATGATTGCCACACTGGTTCTGCTGTTCAGCCTGCTCACAGGCTTTGCCCACGCCGAACCCGCCGC
AATCAACATCAACACTGCCGATATCGAAACACTGGCCAACCTCAATGGTATTGGCCAAAGCAAGGCAGAAGCCATCGTCG
CTTACCGCGAGGCCAACGGTCCTTTCCAGTCCGCTGAAGAGCTCGACAACGTCAAGGGCATTGGTACAGTTACTGTTGAG
AAAAACGCCGACCGTCTGACGGTCGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
49.505 |
100 |
0.562 |
| comEA | Vibrio cholerae C6706 |
49.505 |
100 |
0.562 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
48.148 |
91.011 |
0.438 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.113 |
79.775 |
0.416 |
| comE | Neisseria gonorrhoeae MS11 |
43.038 |
88.764 |
0.382 |
| comE | Neisseria gonorrhoeae MS11 |
43.038 |
88.764 |
0.382 |
| comE | Neisseria gonorrhoeae MS11 |
43.038 |
88.764 |
0.382 |
| comE | Neisseria gonorrhoeae MS11 |
43.038 |
88.764 |
0.382 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
55 |
67.416 |
0.371 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
51.562 |
71.91 |
0.371 |