Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EGX83_RS13800 | Genome accession | NZ_CP033768 |
| Coordinates | 2882360..2882776 (-) | Length | 138 a.a. |
| NCBI ID | WP_086374638.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain FDAARGOS_533 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2877360..2887776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX83_RS13775 (EGX83_13770) | - | 2877715..2878098 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| EGX83_RS13780 (EGX83_13775) | - | 2878308..2878502 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| EGX83_RS13785 (EGX83_13780) | bfr | 2878748..2879212 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| EGX83_RS13790 (EGX83_13785) | - | 2879254..2880882 (-) | 1629 | WP_123793824.1 | PglL family O-oligosaccharyltransferase | - |
| EGX83_RS13795 (EGX83_13790) | - | 2880989..2882299 (-) | 1311 | WP_123793826.1 | O-antigen ligase family protein | - |
| EGX83_RS13800 (EGX83_13795) | pilA | 2882360..2882776 (-) | 417 | WP_086374638.1 | pilin | Machinery gene |
| EGX83_RS13805 (EGX83_13800) | - | 2883118..2883678 (-) | 561 | WP_000258945.1 | TPM domain-containing protein | - |
| EGX83_RS13810 (EGX83_13805) | - | 2883672..2884751 (-) | 1080 | WP_123793828.1 | TPM domain-containing protein | - |
| EGX83_RS13815 (EGX83_13810) | - | 2884773..2885363 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| EGX83_RS13820 (EGX83_13815) | - | 2885495..2886382 (-) | 888 | Protein_2688 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 138 a.a. Molecular weight: 14509.53 Da Isoelectric Point: 4.6017
>NTDB_id=325560 EGX83_RS13800 WP_086374638.1 2882360..2882776(-) (pilA) [Acinetobacter baumannii strain FDAARGOS_533]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTIQTNLQNGKCESDINTENTVAGKYGTAV
VSGSTSPCAITYTFAKDGVSSKLSEKKIVINVQENGVLTKGADTDVDEELLPKSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTIQTNLQNGKCESDINTENTVAGKYGTAV
VSGSTSPCAITYTFAKDGVSSKLSEKKIVINVQENGVLTKGADTDVDEELLPKSFTAS
Nucleotide
Download Length: 417 bp
>NTDB_id=325560 EGX83_RS13800 WP_086374638.1 2882360..2882776(-) (pilA) [Acinetobacter baumannii strain FDAARGOS_533]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTC
AAACTAATTTACAAAATGGAAAATGTGAATCAGATATTAATACAGAAAATACTGTAGCTGGAAAGTATGGTACAGCCGTT
GTAAGTGGTTCAACCTCACCATGTGCAATTACTTATACCTTTGCAAAAGATGGTGTATCCAGTAAATTAAGCGAAAAGAA
AATCGTGATCAATGTTCAAGAAAATGGCGTATTAACTAAAGGGGCTGATACCGATGTGGATGAGGAGTTATTACCGAAAT
CTTTCACAGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTC
AAACTAATTTACAAAATGGAAAATGTGAATCAGATATTAATACAGAAAATACTGTAGCTGGAAAGTATGGTACAGCCGTT
GTAAGTGGTTCAACCTCACCATGTGCAATTACTTATACCTTTGCAAAAGATGGTGTATCCAGTAAATTAAGCGAAAAGAA
AATCGTGATCAATGTTCAAGAAAATGGCGTATTAACTAAAGGGGCTGATACCGATGTGGATGAGGAGTTATTACCGAAAT
CTTTCACAGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
68.31 |
100 |
0.703 |
| pilA | Acinetobacter baumannii strain A118 |
45.39 |
100 |
0.464 |
| pilA | Pseudomonas aeruginosa PAK |
42.177 |
100 |
0.449 |
| pilA | Vibrio cholerae strain A1552 |
41.497 |
100 |
0.442 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.497 |
100 |
0.442 |
| pilA | Vibrio cholerae C6706 |
41.497 |
100 |
0.442 |
| pilE | Neisseria gonorrhoeae MS11 |
44.262 |
88.406 |
0.391 |