Detailed information NTG0323854

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: CNQ82_RS07660
• Genome accession: NZ_CP033460
• Coordinates: 1628035..1628361 (-)
• Length: 108 a.a.
• NCBI ID: WP_123144791.1
• Uniprot ID: -
• Organism: Staphylococcus debuckii strain SDB 2975
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1623035..1633361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CNQ82_RS07630 (CNQ82_07630)	gcvPA	1623554..1624903 (-)	1350	WP_123144786.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
CNQ82_RS07635 (CNQ82_07635)	gcvT	1624924..1626018 (-)	1095	WP_123144787.1	glycine cleavage system aminomethyltransferase GcvT	-
CNQ82_RS07640 (CNQ82_07640)	-	1626206..1626745 (-)	540	WP_420876454.1	shikimate kinase	-
CNQ82_RS07650 (CNQ82_07650)	comGF	1626910..1627320 (-)	411	WP_164711954.1	competence type IV pilus minor pilin ComGF	-
CNQ82_RS13135	-	1627328..1627621 (-)	294	WP_164711955.1	hypothetical protein	-
CNQ82_RS07655 (CNQ82_07655)	comGD	1627602..1628015 (-)	414	WP_240624876.1	competence type IV pilus minor pilin ComGD	-
CNQ82_RS07660 (CNQ82_07660)	comGC	1628035..1628361 (-)	327	WP_123144791.1	competence type IV pilus major pilin ComGC	Machinery gene
CNQ82_RS07665 (CNQ82_07665)	comGB	1628380..1629453 (-)	1074	WP_123144792.1	competence type IV pilus assembly protein ComGB	-
CNQ82_RS07670 (CNQ82_07670)	comGA	1629425..1630399 (-)	975	WP_123144793.1	competence type IV pilus ATPase ComGA	Machinery gene
CNQ82_RS07675 (CNQ82_07675)	-	1630468..1631091 (-)	624	WP_123144794.1	MBL fold metallo-hydrolase	-
CNQ82_RS07680 (CNQ82_07680)	-	1631091..1631420 (-)	330	WP_095105029.1	MTH1187 family thiamine-binding protein	-
CNQ82_RS07685 (CNQ82_07685)	-	1631420..1632406 (-)	987	WP_123144795.1	ROK family glucokinase	-
CNQ82_RS07690 (CNQ82_07690)	-	1632406..1632606 (-)	201	WP_095107267.1	YqgQ family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12047.25 Da
• Isoelectric Point: 9.9668

>NTDB_id=323854 CNQ82_RS07660 WP_123144791.1 1628035..1628361(-) (comGC) [Staphylococcus debuckii strain SDB 2975]
MKKIYLKIKSRNIKAFTLLEMLLVLLVISVLLILIIPNIAKQSEHVQATGCEAQQKMVNSQIEAYTLKNNRKPDSVDDLV
TQGYLKEGQKKCKSGESITIKNGEASIS

Nucleotide

• Length: 327 bp

>NTDB_id=323854 CNQ82_RS07660 WP_123144791.1 1628035..1628361(-) (comGC) [Staphylococcus debuckii strain SDB 2975]
ATGAAAAAAATTTATTTGAAAATAAAAAGCCGAAATATTAAGGCTTTCACGCTTTTAGAAATGTTACTTGTACTTTTAGT
AATCAGTGTTCTCTTGATACTCATTATTCCTAATATCGCTAAGCAATCTGAACATGTACAAGCAACCGGCTGCGAAGCAC
AACAAAAAATGGTAAATAGTCAAATTGAAGCTTATACTTTAAAAAATAATCGAAAACCAGATTCAGTTGATGATCTTGTC
ACTCAAGGATATTTAAAAGAAGGCCAAAAGAAATGCAAATCTGGAGAAAGCATTACTATTAAAAATGGTGAAGCTTCTAT
TAGTTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	70.526	87.963	0.62
comGC	Staphylococcus aureus N315	70.526	87.963	0.62
comGC/cglC	Streptococcus mitis SK321	44.34	98.148	0.435
comGC/cglC	Streptococcus pneumoniae R6	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae D39	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae TIGR4	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae Rx1	43.396	98.148	0.426
comGC/cglC	Streptococcus mitis NCTC 12261	46.739	85.185	0.398
comGC	Bacillus subtilis subsp. subtilis str. 168	41.667	88.889	0.37
comYC	Streptococcus gordonii str. Challis substr. CH1	48.193	76.852	0.37