Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CNQ82_RS07670 | Genome accession | NZ_CP033460 |
| Coordinates | 1629425..1630399 (-) | Length | 324 a.a. |
| NCBI ID | WP_123144793.1 | Uniprot ID | - |
| Organism | Staphylococcus debuckii strain SDB 2975 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1624425..1635399
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNQ82_RS07635 (CNQ82_07635) | gcvT | 1624924..1626018 (-) | 1095 | WP_123144787.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CNQ82_RS07640 (CNQ82_07640) | - | 1626206..1626745 (-) | 540 | WP_420876454.1 | shikimate kinase | - |
| CNQ82_RS07650 (CNQ82_07650) | comGF | 1626910..1627320 (-) | 411 | WP_164711954.1 | competence type IV pilus minor pilin ComGF | - |
| CNQ82_RS13135 | - | 1627328..1627621 (-) | 294 | WP_164711955.1 | hypothetical protein | - |
| CNQ82_RS07655 (CNQ82_07655) | comGD | 1627602..1628015 (-) | 414 | WP_240624876.1 | competence type IV pilus minor pilin ComGD | - |
| CNQ82_RS07660 (CNQ82_07660) | comGC | 1628035..1628361 (-) | 327 | WP_123144791.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CNQ82_RS07665 (CNQ82_07665) | comGB | 1628380..1629453 (-) | 1074 | WP_123144792.1 | competence type IV pilus assembly protein ComGB | - |
| CNQ82_RS07670 (CNQ82_07670) | comGA | 1629425..1630399 (-) | 975 | WP_123144793.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CNQ82_RS07675 (CNQ82_07675) | - | 1630468..1631091 (-) | 624 | WP_123144794.1 | MBL fold metallo-hydrolase | - |
| CNQ82_RS07680 (CNQ82_07680) | - | 1631091..1631420 (-) | 330 | WP_095105029.1 | MTH1187 family thiamine-binding protein | - |
| CNQ82_RS07685 (CNQ82_07685) | - | 1631420..1632406 (-) | 987 | WP_123144795.1 | ROK family glucokinase | - |
| CNQ82_RS07690 (CNQ82_07690) | - | 1632406..1632606 (-) | 201 | WP_095107267.1 | YqgQ family protein | - |
| CNQ82_RS07695 (CNQ82_07695) | - | 1632587..1634047 (-) | 1461 | WP_123144796.1 | rhomboid family protein | - |
| CNQ82_RS07700 (CNQ82_07700) | - | 1634064..1634606 (-) | 543 | WP_123144797.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36921.66 Da Isoelectric Point: 6.8217
>NTDB_id=323855 CNQ82_RS07670 WP_123144793.1 1629425..1630399(-) (comGA) [Staphylococcus debuckii strain SDB 2975]
MKKLLDQILKDAIAKNVSDIHFIPLEKEVSIKFRVNDDLINYDKIEILNYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QTLYNLRISTLPLSLGMESCVIRLSPQYYSQDSKMAGPKNFYHLMNKKQGLILFTGPTGSGKSTMMYEMVAFAQEHLNLN
IITVEDPVEKRITGITQISVNEKAGINYESSFKAILRCDPDIILIGEIRDAQIAKCVIHAALSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQSIALISNQRLVTNQYGNRELAYETMYQSDIQYFFKHDYTMPKHFMKLSKVLTQMSEEGVICEEIL
ERYT
MKKLLDQILKDAIAKNVSDIHFIPLEKEVSIKFRVNDDLINYDKIEILNYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QTLYNLRISTLPLSLGMESCVIRLSPQYYSQDSKMAGPKNFYHLMNKKQGLILFTGPTGSGKSTMMYEMVAFAQEHLNLN
IITVEDPVEKRITGITQISVNEKAGINYESSFKAILRCDPDIILIGEIRDAQIAKCVIHAALSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQSIALISNQRLVTNQYGNRELAYETMYQSDIQYFFKHDYTMPKHFMKLSKVLTQMSEEGVICEEIL
ERYT
Nucleotide
Download Length: 975 bp
>NTDB_id=323855 CNQ82_RS07670 WP_123144793.1 1629425..1630399(-) (comGA) [Staphylococcus debuckii strain SDB 2975]
ATGAAAAAACTTTTAGACCAAATTTTGAAGGATGCAATTGCTAAGAACGTATCAGATATTCATTTTATACCGCTTGAAAA
GGAAGTCTCGATTAAATTCAGAGTTAATGATGATTTGATTAATTACGATAAAATTGAGATTCTAAATTATTCAAAATTGC
TTACCTTTATGAAATTTCAAGCAGGACTCGATGTTTCAAATTATCATCAAGCTCAAAGTGGACAAACAACTTTTAAGCAT
CAAACTTTGTATAATTTGCGGATATCGACTCTACCGCTTTCTTTAGGTATGGAAAGCTGTGTAATACGTCTTTCACCACA
GTATTATTCCCAAGATTCAAAAATGGCAGGACCTAAAAATTTCTATCATCTTATGAATAAGAAACAAGGGCTCATACTTT
TTACGGGACCAACTGGTTCAGGTAAAAGCACTATGATGTATGAAATGGTTGCTTTTGCACAAGAACATTTGAATTTAAAT
ATTATAACCGTCGAAGATCCTGTGGAAAAAAGAATTACTGGTATCACTCAAATATCAGTTAATGAAAAGGCAGGCATTAA
TTATGAGAGTTCTTTCAAAGCCATCTTACGTTGCGATCCCGATATCATTCTTATTGGTGAAATCAGAGATGCTCAAATAG
CTAAATGTGTAATACATGCTGCTTTGAGCGGCCACTTAGTTTTATCCACCTTACATTCTAATGATTGCGAAGGCGCATTA
TTAAGATTATTAGAAATGGGTATCACACCGCAGGAAGCCCAACAATCCATCGCGTTAATCTCAAATCAGCGTTTAGTTAC
AAATCAATACGGCAATCGCGAACTCGCTTATGAAACAATGTATCAGTCAGATATACAGTATTTTTTCAAACATGATTATA
CAATGCCGAAACATTTTATGAAATTAAGTAAAGTATTAACTCAAATGAGCGAAGAGGGCGTTATCTGTGAAGAGATTCTC
GAAAGATATACTTAA
ATGAAAAAACTTTTAGACCAAATTTTGAAGGATGCAATTGCTAAGAACGTATCAGATATTCATTTTATACCGCTTGAAAA
GGAAGTCTCGATTAAATTCAGAGTTAATGATGATTTGATTAATTACGATAAAATTGAGATTCTAAATTATTCAAAATTGC
TTACCTTTATGAAATTTCAAGCAGGACTCGATGTTTCAAATTATCATCAAGCTCAAAGTGGACAAACAACTTTTAAGCAT
CAAACTTTGTATAATTTGCGGATATCGACTCTACCGCTTTCTTTAGGTATGGAAAGCTGTGTAATACGTCTTTCACCACA
GTATTATTCCCAAGATTCAAAAATGGCAGGACCTAAAAATTTCTATCATCTTATGAATAAGAAACAAGGGCTCATACTTT
TTACGGGACCAACTGGTTCAGGTAAAAGCACTATGATGTATGAAATGGTTGCTTTTGCACAAGAACATTTGAATTTAAAT
ATTATAACCGTCGAAGATCCTGTGGAAAAAAGAATTACTGGTATCACTCAAATATCAGTTAATGAAAAGGCAGGCATTAA
TTATGAGAGTTCTTTCAAAGCCATCTTACGTTGCGATCCCGATATCATTCTTATTGGTGAAATCAGAGATGCTCAAATAG
CTAAATGTGTAATACATGCTGCTTTGAGCGGCCACTTAGTTTTATCCACCTTACATTCTAATGATTGCGAAGGCGCATTA
TTAAGATTATTAGAAATGGGTATCACACCGCAGGAAGCCCAACAATCCATCGCGTTAATCTCAAATCAGCGTTTAGTTAC
AAATCAATACGGCAATCGCGAACTCGCTTATGAAACAATGTATCAGTCAGATATACAGTATTTTTTCAAACATGATTATA
CAATGCCGAAACATTTTATGAAATTAAGTAAAGTATTAACTCAAATGAGCGAAGAGGGCGTTATCTGTGAAGAGATTCTC
GAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.514 |
99.691 |
0.583 |
| comGA | Staphylococcus aureus N315 |
58.514 |
99.691 |
0.583 |