Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | Aba7835_RS01560 | Genome accession | NZ_CP033243 |
| Coordinates | 335036..335521 (+) | Length | 161 a.a. |
| NCBI ID | WP_000993726.1 | Uniprot ID | A0A242SN80 |
| Organism | Acinetobacter baumannii strain 7835 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 330036..340521
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba7835_RS01540 (Aba7835_01565) | - | 331429..332316 (+) | 888 | WP_001017328.1 | metal-dependent hydrolase | - |
| Aba7835_RS01545 (Aba7835_01570) | - | 332446..333036 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| Aba7835_RS01550 (Aba7835_01575) | - | 333058..334140 (+) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| Aba7835_RS01555 (Aba7835_01580) | - | 334134..334694 (+) | 561 | WP_000258950.1 | TPM domain-containing protein | - |
| Aba7835_RS01560 (Aba7835_01585) | pilA | 335036..335521 (+) | 486 | WP_000993726.1 | pilin | Machinery gene |
| Aba7835_RS01565 (Aba7835_01590) | - | 335697..337325 (+) | 1629 | WP_002015646.1 | PglL family O-oligosaccharyltransferase | - |
| Aba7835_RS01570 (Aba7835_01595) | bfr | 337367..337831 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| Aba7835_RS01575 (Aba7835_01600) | - | 338077..338271 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| Aba7835_RS01580 (Aba7835_01605) | - | 338481..338864 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16591.91 Da Isoelectric Point: 5.0937
>NTDB_id=322802 Aba7835_RS01560 WP_000993726.1 335036..335521(+) (pilA) [Acinetobacter baumannii strain 7835]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLGIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=322802 Aba7835_RS01560 WP_000993726.1 335036..335521(+) (pilA) [Acinetobacter baumannii strain 7835]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAGGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.86 |
97.516 |
0.447 |
| pilA | Vibrio cholerae strain A1552 |
45.86 |
97.516 |
0.447 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
41.558 |
95.652 |
0.398 |
| pilE | Neisseria gonorrhoeae MS11 |
37.736 |
98.758 |
0.373 |
| comP | Acinetobacter baylyi ADP1 |
36.709 |
98.137 |
0.36 |