Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BCB4264_RS19080 Genome accession   NC_011725
Coordinates   3796570..3797808 (-) Length   412 a.a.
NCBI ID   WP_000990697.1    Uniprot ID   B7HDQ5
Organism   Bacillus cereus B4264     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3791570..3802808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCB4264_RS19060 (BCB4264_A3875) spoVS 3791983..3792243 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  BCB4264_RS19065 (BCB4264_A3876) - 3792393..3793187 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  BCB4264_RS19070 (BCB4264_A3877) rny 3793350..3794912 (-) 1563 WP_000204911.1 ribonuclease Y -
  BCB4264_RS19075 (BCB4264_A3878) recA 3795395..3796426 (-) 1032 WP_001283862.1 recombinase RecA Machinery gene
  BCB4264_RS19080 (BCB4264_A3879) cinA 3796570..3797808 (-) 1239 WP_000990697.1 competence/damage-inducible protein CinA Machinery gene
  BCB4264_RS19085 (BCB4264_A3880) pgsA 3797829..3798407 (-) 579 WP_001052967.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BCB4264_RS19090 (BCB4264_A3881) - 3798472..3799383 (-) 912 WP_000137461.1 RodZ domain-containing protein -
  BCB4264_RS19095 (BCB4264_A3882) - 3799405..3800190 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  BCB4264_RS19100 (BCB4264_A3883) - 3800329..3800577 (-) 249 WP_000114450.1 DUF3243 domain-containing protein -
  BCB4264_RS19105 (BCB4264_A3884) - 3800653..3801366 (-) 714 WP_000759608.1 SDR family oxidoreductase -
  BCB4264_RS19110 (BCB4264_A3885) - 3801467..3802753 (-) 1287 WP_000411976.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45581.89 Da        Isoelectric Point: 5.2280

>NTDB_id=32083 BCB4264_RS19080 WP_000990697.1 3796570..3797808(-) (cinA) [Bacillus cereus B4264]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IATSLDEELVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGVNKNEKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQHVLRVPEEV
LHTDGAVSKECARYLAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIRERTAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=32083 BCB4264_RS19080 WP_000990697.1 3796570..3797808(-) (cinA) [Bacillus cereus B4264]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTATCATACTGTTGTTGGTGATAATAATAAGCGATTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATACTTATTTTCACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAAGAAACG
ATAGCTACTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATGACCACGGTATGG
CGCCGGGTATGGGGGTAAATAAGAACGAAAAAGTTTATATTTTATTACCAGGGCCGCCAAAAGAAATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAATTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTCGGTAT
TGGGGAGTCCCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACAAACCCAACAATCGCCCCGTTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCGTGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAACGCTGGTG
TTTCTTCTGTGTTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACGTGTGCCTGAAGAAGTG
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATGTACTAAAAGCGGATAT
CGGAATTAGTTTCACTGGTGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAACCAGGAACAGTATTTGTTGGGCTTTCGA
TTAAGGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGAACAGCAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B7HDQ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.252

100

0.583
  cinA Streptococcus pneumoniae TIGR4

46.539

100

0.473
  cinA Streptococcus mitis SK321

46.301

100

0.471
  cinA Streptococcus pneumoniae Rx1

46.062

100

0.468
  cinA Streptococcus pneumoniae R6

46.062

100

0.468
  cinA Streptococcus pneumoniae D39

45.823

100

0.466
  cinA Streptococcus mitis NCTC 12261

45.823

100

0.466
  cinA Streptococcus mutans UA159

45.074

98.544

0.444
  cinA Streptococcus suis isolate S10

40.318

91.505

0.369

Multiple sequence alignment