Detailed information NTG0317339

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: E7Z57_RS10390
• Genome accession: NZ_CP039339
• Coordinates: 2146927..2147580 (+)
• Length: 217 a.a.
• NCBI ID: WP_064049381.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain UW386
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2141927..2152580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E7Z57_RS10370 (E7Z57_10370)	-	2142884..2143078 (+)	195	WP_064049378.1	hypothetical protein	-
E7Z57_RS10380 (E7Z57_10380)	mnmC	2143305..2145314 (+)	2010	WP_138929042.1	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	-
E7Z57_RS10385 (E7Z57_10385)	tig	2145548..2146897 (+)	1350	WP_064049380.1	trigger factor	-
E7Z57_RS10390 (E7Z57_10390)	clpP	2146927..2147580 (+)	654	WP_064049381.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
E7Z57_RS10395 (E7Z57_10395)	clpX	2147746..2149020 (+)	1275	WP_020748515.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
E7Z57_RS10400 (E7Z57_10400)	lon	2149191..2151611 (+)	2421	WP_064049382.1	endopeptidase La	-
E7Z57_RS10405 (E7Z57_10405)	-	2151785..2152057 (+)	273	WP_064049383.1	HU family DNA-binding protein	-
E7Z57_RS24735	-	2152329..2152499 (-)	171	WP_155738643.1	hypothetical protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23786.28 Da
• Isoelectric Point: 5.1001

>NTDB_id=317339 E7Z57_RS10390 WP_064049381.1 2146927..2147580(+) (clpP) [Ralstonia pseudosolanacearum strain UW386]
MIRNELIDQLARTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDK
DISLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEI
QAREILYLRERLNTILSEVTSQPVDKIARDTDRDNFMSGDQAKEYGLIDKVLARRGA

Nucleotide

• Length: 654 bp

>NTDB_id=317339 E7Z57_RS10390 WP_064049381.1 2146927..2147580(+) (clpP) [Ralstonia pseudosolanacearum strain UW386]
ATGATCCGCAATGAACTGATCGACCAGCTCGCCCGCACCCAGGCTTCCGCGCTCGAAACGCAGGGCCTCGGACTGGTGCC
GATGGTGGTCGAGCAGTCGGGCCGCGGCGAACGCGCCTATGACATCTACTCGCGCCTGCTGAAGGAGCGCGTGATTTTCA
TGGTGGGCGAGGTCAACGACCAGACTGCCAATCTCGTGGTGGCGCAGTTGCTGTTCCTGGAGAGCGAGAACCCGGACAAG
GACATCTCGCTGTACATCAACTCGCCGGGTGGTTCGGTGTCGGCGGGCCTGGCGATGTATGACACGATGCAGTTCGTCAA
GCCCGACGTGTCCACGCTGTGCATGGGCATGGCCGCCAGCATGGGCGCATTCCTGCTGGCCGCCGGCGCGAAGGGCAAGC
GCTATGCGCTGCCGAACTCGCGGATCATGATCCACCAGCCGCTGGGCGGCGCGCGCGGCCAGGCCTCGGACATCGAGATC
CAGGCGCGTGAAATCCTGTATCTGCGCGAACGTCTGAACACGATCCTGTCCGAAGTCACCAGCCAGCCCGTGGACAAGAT
CGCCCGCGATACGGACCGCGACAATTTCATGAGCGGCGACCAGGCCAAGGAGTACGGCCTGATCGACAAGGTGCTGGCTC
GGCGGGGTGCCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (35-214)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	67.188	88.479	0.594
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.368	87.558	0.59
clpP	Streptococcus pneumoniae D39	52.85	88.94	0.47
clpP	Streptococcus pneumoniae R6	52.85	88.94	0.47
clpP	Streptococcus pneumoniae TIGR4	52.85	88.94	0.47
clpP	Streptococcus pneumoniae Rx1	52.85	88.94	0.47
clpP	Lactococcus lactis subsp. cremoris KW2	53.684	87.558	0.47
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	52.105	87.558	0.456
clpP	Streptococcus thermophilus LMD-9	50.777	88.94	0.452
clpP	Streptococcus thermophilus LMG 18311	50.777	88.94	0.452
clpP	Streptococcus pyogenes JRS4	51.053	87.558	0.447
clpP	Streptococcus pyogenes MGAS315	51.053	87.558	0.447
clpP	Streptococcus mutans UA159	50.785	88.018	0.447