Detailed information NTG0317294

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D7I46_RS03860
• Genome accession: NZ_CP032627
• Coordinates: 807932..808777 (-)
• Length: 281 a.a.
• NCBI ID: WP_120771685.1
• Uniprot ID: A0A387BH02
• Organism: Lactococcus allomyrinae strain 1JSPR-7
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 802932..813777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7I46_RS03850 (D7I46_03850)	trmFO	804209..805549 (-)	1341	WP_120771683.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
D7I46_RS03855 (D7I46_03855)	topA	805642..807774 (-)	2133	WP_120771684.1	type I DNA topoisomerase	-
D7I46_RS03860 (D7I46_03860)	dprA	807932..808777 (-)	846	WP_120771685.1	DNA-processing protein DprA	Machinery gene
D7I46_RS03865 (D7I46_03865)	-	809075..810028 (+)	954	WP_120771686.1	rhodanese-related sulfurtransferase	-
D7I46_RS03870 (D7I46_03870)	alsS	810143..811807 (-)	1665	WP_120771687.1	acetolactate synthase AlsS	-
D7I46_RS03875 (D7I46_03875)	-	811965..813215 (-)	1251	WP_120771688.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31921.87 Da
• Isoelectric Point: 9.9678

>NTDB_id=317294 D7I46_RS03860 WP_120771685.1 807932..808777(-) (dprA) [Lactococcus allomyrinae strain 1JSPR-7]
MITNFDLFRWKNAGMTNLGVNKLLKFYRRYEKKISLRQMGQVAQIKSIPNFIESYKNQNVKELRERYKQFSSFSILDENY
PERLKEIYNPPVLIFYQGNIELLKTPKLAFVGSRESTPNGVKAVQKLIKELNQSFTIVSGLARGIDAASHISAIKNQTST
IAVIGTGLDIFYPTENRKIQEYLSKKQLILSEYAPGEKPLKYHFPERNRIIAGLSRGVVVVEAKLRSGSLITCERALEEG
RDVFAVPGNISDGFSDGCNYLIQQGAKLVFKGQDILGEYMY

Nucleotide

• Length: 846 bp

>NTDB_id=317294 D7I46_RS03860 WP_120771685.1 807932..808777(-) (dprA) [Lactococcus allomyrinae strain 1JSPR-7]
ATGATAACAAATTTCGATTTATTTCGATGGAAAAATGCTGGAATGACCAATTTAGGAGTGAATAAGCTACTAAAATTTTA
TAGAAGATATGAAAAGAAGATAAGTTTACGTCAAATGGGACAAGTTGCACAAATCAAATCTATCCCAAATTTCATTGAAT
CTTATAAAAATCAGAATGTTAAAGAACTAAGAGAGAGGTACAAGCAATTTTCATCTTTTTCTATTCTTGATGAAAATTAC
CCAGAAAGACTAAAAGAAATCTATAATCCTCCTGTTTTAATTTTTTATCAAGGAAATATAGAATTGCTTAAAACACCTAA
ACTTGCATTTGTCGGAAGCCGCGAATCAACACCAAACGGTGTTAAAGCTGTTCAAAAATTAATCAAGGAACTCAATCAAA
GTTTCACGATTGTCAGTGGGTTAGCGAGAGGAATTGATGCTGCAAGTCATATTTCTGCTATTAAAAATCAAACATCAACT
ATTGCCGTCATAGGAACAGGATTGGATATTTTTTACCCTACCGAGAATCGAAAAATACAAGAATATCTCTCAAAAAAACA
ACTCATCCTTTCTGAGTATGCACCTGGAGAAAAACCTCTCAAATATCATTTTCCCGAACGTAATCGTATTATTGCAGGTC
TATCAAGAGGTGTAGTAGTTGTCGAAGCAAAATTAAGAAGTGGTAGTTTAATTACGTGTGAACGAGCTTTGGAAGAGGGA
AGAGATGTCTTTGCTGTACCTGGAAATATCTCTGATGGTTTTTCTGACGGCTGTAATTATCTTATTCAACAGGGAGCTAA
ATTAGTCTTTAAAGGACAAGATATTTTAGGAGAATATATGTATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (70-269)

3D structure

• AlphaFold DB: A0A387BH02

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	82.562	100	0.826
dprA	Streptococcus mutans UA159	57.857	99.644	0.577
dprA/cilB/dalA	Streptococcus mitis SK321	53.571	99.644	0.534
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.214	99.644	0.53
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.214	99.644	0.53
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.214	99.644	0.53
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.214	99.644	0.53
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.214	99.644	0.53
dprA	Haemophilus influenzae Rd KW20	40.146	97.509	0.391
dprA	Legionella pneumophila strain ERS1305867	38.462	97.153	0.374
dprA	Latilactobacillus sakei subsp. sakei 23K	40.234	91.103	0.367
dprA	Bacillus subtilis subsp. subtilis str. 168	43.777	82.918	0.363