Detailed information NTG0317121

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: D7D50_RS02020
• Genome accession: NZ_CP032620
• Coordinates: 380952..381404 (-)
• Length: 150 a.a.
• NCBI ID: WP_162614527.1
• Uniprot ID: -
• Organism: Streptococcus koreensis strain KCOM 2890 (=JS71)
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 375952..386404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D7D50_RS01995 (D7D50_01995)	folP	376368..377324 (-)	957	WP_165851222.1	dihydropteroate synthase	-
D7D50_RS02000 (D7D50_02000)	-	377483..378157 (-)	675	WP_227877753.1	CPBP family intramembrane glutamic endopeptidase	-
D7D50_RS02005 (D7D50_02005)	-	378310..379506 (-)	1197	WP_120701350.1	acetate kinase	-
D7D50_RS02010 (D7D50_02010)	comYH	379555..380508 (-)	954	WP_120701351.1	class I SAM-dependent methyltransferase	Machinery gene
D7D50_RS02015 (D7D50_02015)	comGG	380540..380923 (-)	384	WP_418856565.1	competence type IV pilus minor pilin ComGG	-
D7D50_RS02020 (D7D50_02020)	comGF/cglF	380952..381404 (-)	453	WP_162614527.1	competence type IV pilus minor pilin ComGF	Machinery gene
D7D50_RS02025 (D7D50_02025)	comGE	381388..381681 (-)	294	WP_120701354.1	competence type IV pilus minor pilin ComGE	-
D7D50_RS02030 (D7D50_02030)	comGD/cglD	381647..382051 (-)	405	WP_120702309.1	competence type IV pilus minor pilin ComGD	Machinery gene
D7D50_RS02035 (D7D50_02035)	comGC/cglC	382041..382358 (-)	318	WP_023027561.1	competence type IV pilus major pilin ComGC	Machinery gene
D7D50_RS02040 (D7D50_02040)	comYB	382355..383377 (-)	1023	WP_120701355.1	competence type IV pilus assembly protein ComGB	Machinery gene
D7D50_RS02045 (D7D50_02045)	comYA	383301..384260 (-)	960	WP_120701356.1	competence type IV pilus ATPase ComGA	Machinery gene
D7D50_RS02050 (D7D50_02050)	-	384365..384742 (-)	378	WP_120701357.1	DUF1033 family protein	-
D7D50_RS02060 (D7D50_02060)	-	385102..386205 (-)	1104	WP_120701358.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 150 a.a.
• Molecular weight: 16990.63 Da
• Isoelectric Point: 5.0425

>NTDB_id=317121 D7D50_RS02020 WP_162614527.1 380952..381404(-) (comGF/cglF) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
MLKRNKLPAFTLLEALVALLVISGGLLVFQGLTSLLRQELQYQSQIKQEEWLLFQDQLDIELSRSQFEGVRDNKLYLVQD
QKPIAIGLAKGGDLRKTDATGRGYQPMIDGVESALIEKRGDLVSIQLRFAEGLEREVVYRVVDKDKKEAD

Nucleotide

• Length: 453 bp

>NTDB_id=317121 D7D50_RS02020 WP_162614527.1 380952..381404(-) (comGF/cglF) [Streptococcus koreensis strain KCOM 2890 (=JS71)]
CTGTTGAAAAGAAATAAACTTCCAGCCTTTACTTTACTGGAGGCCTTGGTTGCCCTCCTTGTCATTAGCGGTGGTTTATT
GGTGTTTCAAGGATTGACAAGCCTCTTGCGTCAAGAACTCCAGTACCAAAGTCAAATCAAGCAAGAAGAGTGGTTGCTTT
TTCAGGATCAACTGGACATTGAATTATCTCGCAGCCAATTTGAAGGGGTCAGAGACAATAAACTCTATCTTGTTCAGGAT
CAGAAACCTATAGCCATTGGATTGGCTAAAGGGGGAGATCTCCGAAAGACAGATGCGACTGGCCGTGGCTATCAACCGAT
GATAGACGGAGTCGAATCCGCCTTGATTGAAAAAAGAGGAGATTTGGTGTCTATTCAACTTCGCTTTGCAGAAGGATTAG
AAAGGGAGGTGGTCTACCGTGTGGTGGATAAGGATAAAAAAGAAGCAGATTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	57.554	92.667	0.533
comGF/cglF	Streptococcus pneumoniae D39	57.554	92.667	0.533
comGF/cglF	Streptococcus pneumoniae R6	57.554	92.667	0.533
comGF/cglF	Streptococcus pneumoniae TIGR4	57.554	92.667	0.533
comGF/cglF	Streptococcus mitis NCTC 12261	56.115	92.667	0.52
comGF/cglF	Streptococcus mitis SK321	56.115	92.667	0.52
comYF	Streptococcus mutans UA159	41.379	96.667	0.4
comYF	Streptococcus mutans UA140	41.379	96.667	0.4
comGF	Lactococcus lactis subsp. cremoris KW2	40.58	92	0.373