Detailed information NTG0314729

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CDG62_RS04170
• Genome accession: NZ_CP032286
• Coordinates: 301417..302475 (+)
• Length: 352 a.a.
• NCBI ID: WP_087527293.1
• Uniprot ID: -
• Organism: Acinetobacter sp. WCHA55
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 296417..307475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG62_RS04155 (CDG62_04160)	mraY	296697..297815 (+)	1119	WP_087527290.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
CDG62_RS04160 (CDG62_04165)	-	297885..298691 (+)	807	WP_087527291.1	putative RNA methyltransferase	-
CDG62_RS04165 (CDG62_04170)	ponA	298723..301251 (-)	2529	WP_087527292.1	penicillin-binding protein PBP1a	-
CDG62_RS04170 (CDG62_04175)	pilM	301417..302475 (+)	1059	WP_087527293.1	pilus assembly protein PilM	Machinery gene
CDG62_RS04175 (CDG62_04180)	pilN	302475..303131 (+)	657	WP_087527294.1	PilN domain-containing protein	Machinery gene
CDG62_RS04180 (CDG62_04185)	pilO	303128..303865 (+)	738	WP_087527295.1	type 4a pilus biogenesis protein PilO	Machinery gene
CDG62_RS04185 (CDG62_04190)	pilP	303865..304392 (+)	528	WP_087527296.1	pilus assembly protein PilP	Machinery gene
CDG62_RS04190 (CDG62_04195)	pilQ	304411..306489 (+)	2079	WP_087527297.1	type IV pilus secretin PilQ	Machinery gene
CDG62_RS04195 (CDG62_04200)	-	306578..307060 (+)	483	WP_265088291.1	shikimate kinase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38951.52 Da
• Isoelectric Point: 4.4221

>NTDB_id=314729 CDG62_RS04170 WP_087527293.1 301417..302475(+) (pilM) [Acinetobacter sp. WCHA55]
MLRLYRKPSKGLIGVDISSTSVKVLELSVKNNRYWVESYALVPLPEGSVVEKNILNPEAVGDALERAVNLANVQSTEVAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLANPNRVNVLLVATRIENVEARAEALEL
GGLTPKIADVESFAIENAFKVFSDTLPMGVNTVGILDIGHTMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKSRTLPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=314729 CDG62_RS04170 WP_087527293.1 301417..302475(+) (pilM) [Acinetobacter sp. WCHA55]
GTGCTCAGGTTATATCGTAAGCCAAGTAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTATTGGAACT
TTCTGTTAAAAACAATCGGTACTGGGTGGAGAGCTATGCACTAGTCCCATTACCAGAAGGAAGTGTGGTCGAAAAAAATA
TATTGAATCCAGAAGCAGTTGGTGATGCCCTTGAGCGTGCGGTAAATTTGGCCAATGTTCAATCGACGGAGGTAGCGCTG
GCAGTTCCGACGTCTATGGTGATTACTAAAATCATTGAAATGGATGCAGATATGAACGATGACGAACGTGAGATTCAGAT
TCGTGATGATGCTGAACAATATATTCCATTCCCATTAGATGAAGCGAGTTTGGATTTTGAAGTTCTTCCAGACCGTTTAG
CCAATCCCAATCGTGTCAACGTACTCCTCGTTGCAACCCGCATTGAAAATGTAGAGGCGCGTGCAGAAGCATTGGAGCTG
GGTGGTTTAACGCCTAAGATTGCCGATGTTGAAAGTTTCGCCATTGAAAATGCATTCAAAGTCTTTTCAGATACGCTTCC
AATGGGCGTAAACACCGTTGGAATTTTAGACATTGGTCATACCATGACCACCTTGTCCGTTATGCAAAATAATAAAGTCA
TTTATACTCGTGAACAGGTGTTCGGTGGTAAACAATTGACTCAAGAAATTCAAAACCGTTATGGGTTGTCTTTTGAAGAA
GCGGGACGTGCTAAAAAAAGCCGTACCCTGCCTGACGACTATGATATTGAAGTACTTGAGCCTTTTCTTGAAGCGGTAGT
GCAACAAGCAGCACGTTCTTTGCAGTTCTTCTTTTCGTCCTCTCAATTTAATGAGATCGATCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCAGGACTAGCGAAGTTATTACAACAAAAATTAGGTTATCGGGTCACCATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCACAAATCGACATTAAAAAAATTGAAAATGATGCTTCATCACTCATGGTGGCATGTGGATTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	80.398	100	0.804
pilM	Legionella pneumophila strain ERS1305867	40.96	100	0.412