Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | CDG62_RS04185 | Genome accession | NZ_CP032286 |
| Coordinates | 303865..304392 (+) | Length | 175 a.a. |
| NCBI ID | WP_087527296.1 | Uniprot ID | A0A385N3U4 |
| Organism | Acinetobacter sp. WCHA55 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 298865..309392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDG62_RS04170 (CDG62_04175) | pilM | 301417..302475 (+) | 1059 | WP_087527293.1 | pilus assembly protein PilM | Machinery gene |
| CDG62_RS04175 (CDG62_04180) | pilN | 302475..303131 (+) | 657 | WP_087527294.1 | PilN domain-containing protein | Machinery gene |
| CDG62_RS04180 (CDG62_04185) | pilO | 303128..303865 (+) | 738 | WP_087527295.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CDG62_RS04185 (CDG62_04190) | pilP | 303865..304392 (+) | 528 | WP_087527296.1 | pilus assembly protein PilP | Machinery gene |
| CDG62_RS04190 (CDG62_04195) | pilQ | 304411..306489 (+) | 2079 | WP_087527297.1 | type IV pilus secretin PilQ | Machinery gene |
| CDG62_RS04195 (CDG62_04200) | - | 306578..307060 (+) | 483 | WP_265088291.1 | shikimate kinase | - |
| CDG62_RS04200 (CDG62_04205) | aroB | 307091..308176 (+) | 1086 | WP_087527299.1 | 3-dehydroquinate synthase | - |
| CDG62_RS04205 (CDG62_04210) | - | 308184..309023 (+) | 840 | WP_087527300.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19323.50 Da Isoelectric Point: 7.1331
>NTDB_id=314732 CDG62_RS04185 WP_087527296.1 303865..304392(+) (pilP) [Acinetobacter sp. WCHA55]
MKYQNLLLSLCVGLLLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVTNITATQIDLIEIIPDGREG
YVERPRSLVLIGLAP
MKYQNLLLSLCVGLLLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVTNITATQIDLIEIIPDGREG
YVERPRSLVLIGLAP
Nucleotide
Download Length: 528 bp
>NTDB_id=314732 CDG62_RS04185 WP_087527296.1 303865..304392(+) (pilP) [Acinetobacter sp. WCHA55]
ATGAAATATCAAAACCTCTTACTTAGTCTTTGCGTAGGACTACTCCTTGTTGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGCAATCAGCCACCATTGCCGATTGAGCCTGCGCCAGATTTCCCACCTGTGCCGACTTTTA
ATTATGCAGCGCATCAATTAAAGAGCCCATTCATGCCAAGTTCGCTAGCTGCTGAACTGAAAATCATGGCTGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAACCCTTAGAAAGTTATGCGATTGAATCGCTGAACATGAAAGGCAGCATGCG
CGGACAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGCGGTAGTTATTTGG
GAATGAATCATGGTCGTGTGACTAATATTACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAACGCCCGAGAAGCCTAGTATTAATTGGGTTGGCGCCTTAA
ATGAAATATCAAAACCTCTTACTTAGTCTTTGCGTAGGACTACTCCTTGTTGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGCAATCAGCCACCATTGCCGATTGAGCCTGCGCCAGATTTCCCACCTGTGCCGACTTTTA
ATTATGCAGCGCATCAATTAAAGAGCCCATTCATGCCAAGTTCGCTAGCTGCTGAACTGAAAATCATGGCTGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAACCCTTAGAAAGTTATGCGATTGAATCGCTGAACATGAAAGGCAGCATGCG
CGGACAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGCGGTAGTTATTTGG
GAATGAATCATGGTCGTGTGACTAATATTACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAACGCCCGAGAAGCCTAGTATTAATTGGGTTGGCGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
77.143 |
100 |
0.771 |
| comL | Acinetobacter baylyi ADP1 |
70.286 |
100 |
0.703 |