Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Machinery gene
Locus tag   D0T92_RS02735 Genome accession   NZ_CP031700
Coordinates   610784..612031 (+) Length   415 a.a.
NCBI ID   WP_318527727.1    Uniprot ID   -
Organism   Neisseria zalophi strain ATCC BAA-2455     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 605784..617031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D0T92_RS02730 (D0T92_02765) pilF 609062..610741 (+) 1680 WP_151049999.1 type IV-A pilus assembly ATPase PilB Machinery gene
  D0T92_RS02735 (D0T92_02770) pilG 610784..612031 (+) 1248 WP_318527727.1 type II secretion system F family protein Machinery gene
  D0T92_RS02740 (D0T92_02775) pilD 612035..612898 (+) 864 WP_151050001.1 A24 family peptidase Machinery gene
  D0T92_RS02745 (D0T92_02780) coaE 612900..613523 (+) 624 WP_151050003.1 dephospho-CoA kinase -
  D0T92_RS02750 (D0T92_02785) zapD 613520..614287 (+) 768 WP_151050005.1 cell division protein ZapD -
  D0T92_RS02755 (D0T92_02790) - 614291..614476 (+) 186 WP_151050007.1 DNA gyrase inhibitor YacG -
  D0T92_RS02760 (D0T92_02795) - 614837..615802 (+) 966 WP_191963658.1 MBL fold metallo-hydrolase -

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45629.76 Da        Isoelectric Point: 9.9839

>NTDB_id=310545 D0T92_RS02735 WP_318527727.1 610784..612031(+) (pilG) [Neisseria zalophi strain ATCC BAA-2455]
MSKTTMGRRSAKPTKKDKGVRFSFEGRNIETEQMVRGEVVAKNEEEARKKIQRRGIKPLRVSKVKAVRKKRITQEDITVF
TRQLATMMKAGLPLMQAFEIVAKGHSNPSVTQMLMEIRADVEQGSALGKAFSKHPKYFDRFYCNLIAAGEAGGVLETLLD
KLAVYKEKTQAIKKKVKSALTYPIAIVVVAIVLVFIMMVFVLPAFGQVYSSMGAELPGLTQIVMSISDFFVEYAWVIVVG
TVAICYAAFQWYKKSPTLQKRVDAVLLRLPIFGPIVKKATIARWARTTSTLFAAGVPLVEVLDSVSGAAGNILYEEATQD
IRAKVTQGLSLTSSMQGTDMFPNMVLQMASIGEESGSLDDMLNKAAEFYEDEVDNSVAQLSSLMEPIIMVVLGSIIGVIL
VAMYLPLFNLGNVVG

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=310545 D0T92_RS02735 WP_318527727.1 610784..612031(+) (pilG) [Neisseria zalophi strain ATCC BAA-2455]
ATGAGTAAGACCACAATGGGGCGGCGCTCTGCCAAACCGACCAAAAAAGATAAGGGTGTCCGTTTTTCTTTCGAAGGCCG
CAATATCGAAACCGAGCAAATGGTGCGTGGTGAAGTGGTAGCGAAAAACGAAGAAGAAGCGCGCAAGAAGATTCAACGTC
GTGGCATTAAACCGTTGCGTGTCAGCAAAGTGAAAGCTGTGCGTAAAAAAAGGATTACACAAGAAGATATCACAGTATTT
ACCCGTCAATTGGCAACCATGATGAAAGCCGGCCTGCCGTTAATGCAGGCGTTTGAAATTGTGGCCAAAGGGCATTCAAA
TCCATCTGTGACTCAAATGCTGATGGAAATTCGGGCTGATGTGGAGCAGGGTAGTGCTTTGGGTAAGGCTTTTAGCAAAC
ATCCAAAATATTTCGACCGCTTTTATTGCAATCTGATTGCCGCCGGTGAGGCGGGCGGTGTATTGGAAACCTTATTAGAT
AAGTTGGCAGTATATAAAGAAAAAACCCAAGCGATTAAGAAAAAAGTAAAAAGTGCACTGACCTATCCGATTGCTATTGT
GGTGGTTGCCATTGTATTGGTGTTTATTATGATGGTATTCGTGCTACCGGCATTCGGCCAGGTTTACAGCAGTATGGGGG
CGGAGTTGCCGGGTCTGACACAGATTGTGATGAGCATATCGGACTTCTTTGTTGAGTATGCTTGGGTGATTGTGGTCGGC
ACCGTAGCGATATGTTATGCAGCATTTCAATGGTATAAAAAATCACCGACACTACAAAAACGTGTTGATGCCGTATTGTT
GCGATTGCCTATTTTCGGGCCGATTGTAAAAAAAGCCACTATTGCACGTTGGGCAAGAACGACTTCCACGCTGTTTGCTG
CCGGTGTGCCTTTGGTTGAGGTATTGGATTCGGTATCCGGTGCGGCAGGCAATATTCTTTATGAAGAAGCCACGCAGGAT
ATCCGTGCGAAGGTAACGCAGGGTTTGTCACTTACATCCAGTATGCAGGGAACTGATATGTTCCCCAATATGGTGCTGCA
AATGGCATCTATCGGGGAAGAGTCTGGCTCTCTAGATGATATGTTAAATAAAGCCGCCGAATTTTATGAAGATGAAGTGG
ATAATTCTGTTGCACAGTTATCTTCATTGATGGAGCCGATTATTATGGTGGTGCTCGGTTCGATTATCGGGGTGATTTTG
GTTGCCATGTATCTGCCGCTGTTTAACTTGGGTAACGTGGTGGGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

69.25

96.386

0.667

  pilG Neisseria meningitidis 44/76-A

68.734

97.108

0.667

  pilC Legionella pneumophila strain ERS1305867

46.985

95.904

0.451

  pilC Acinetobacter baumannii D1279779

44.724

95.904

0.429

  pilC Acinetobacter baylyi ADP1

44.11

96.145

0.424

  pilC Pseudomonas stutzeri DSM 10701

44.332

95.663

0.424


Multiple sequence alignment