Detailed information NTG0310168

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ES300_RS10510
• Genome accession: NZ_CP038251
• Coordinates: 2055443..2056540 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266666.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901944
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2050443..2061540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES300_RS10485 (ES300_11005)	pgsA	2050964..2051509 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ES300_RS10490 (ES300_11010)	rodZ	2051520..2052341 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
ES300_RS10495 (ES300_11015)	yfmH	2052383..2053666 (-)	1284	WP_000170217.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ES300_RS10500 (ES300_11020)	yfmF	2053663..2054913 (-)	1251	WP_000424271.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
ES300_RS10505 (ES300_11025)	yaaA	2055072..2055440 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
ES300_RS10510 (ES300_11030)	recF	2055443..2056540 (+)	1098	WP_000266666.1	DNA replication/repair protein RecF	Machinery gene
ES300_RS10515 (ES300_11035)	guaB	2056591..2058069 (-)	1479	WP_000073424.1	IMP dehydrogenase	-
ES300_RS10520 (ES300_11040)	trpS	2058221..2059246 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
ES300_RS10525 (ES300_11045)	-	2059452..2061074 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41915.99 Da
• Isoelectric Point: 8.6711

>NTDB_id=310168 ES300_RS10510 WP_000266666.1 2055443..2056540(+) (recF) [Streptococcus pneumoniae strain TVO_1901944]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSKSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=310168 ES300_RS10510 WP_000266666.1 2055443..2056540(+) (recF) [Streptococcus pneumoniae strain TVO_1901944]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATCGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAAATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTACC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.178	100	0.992
recF	Bacillus subtilis subsp. subtilis str. 168	45.628	100	0.458