Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   E3C75_RS07105 Genome accession   NZ_CP038020
Coordinates   1337592..1337780 (+) Length   62 a.a.
NCBI ID   WP_003045927.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1332592..1342780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS07105 prx 1337592..1337780 (+) 189 WP_003045927.1 hypothetical protein Regulator
  E3C75_RS07110 - 1337962..1339710 (+) 1749 WP_111679566.1 type IA DNA topoisomerase -
  E3C75_RS07115 clpE 1339712..1341556 (+) 1845 WP_172451564.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  E3C75_RS07120 - 1341649..1341996 (+) 348 WP_000791789.1 TrbC/VirB2 family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7081.92 Da        Isoelectric Point: 4.0742

>NTDB_id=309244 E3C75_RS07105 WP_003045927.1 1337592..1337780(+) (prx) [Streptococcus thermophilus strain ATCC 19258]
MLHYDELKQAVDNGYVKGDEVSVVRKEGKIFDYVLPNEPVRPWEVVTVESLSEVLSELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=309244 E3C75_RS07105 WP_003045927.1 1337592..1337780(+) (prx) [Streptococcus thermophilus strain ATCC 19258]
ATGTTACATTATGATGAATTGAAGCAGGCTGTAGATAATGGTTATGTTAAAGGGGATGAGGTTAGTGTGGTCAGAAAAGA
AGGGAAGATTTTTGATTATGTTTTACCAAATGAACCTGTAAGACCGTGGGAAGTTGTAACAGTAGAATCCTTATCTGAAG
TTCTGTCTGAGCTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

66.102

95.161

0.629
  prx Streptococcus pyogenes MGAS315

63.333

96.774

0.613
  prx Streptococcus pyogenes MGAS315

61.017

95.161

0.581
  prx Streptococcus pyogenes MGAS315

58.333

96.774

0.565
  prx Streptococcus pyogenes MGAS315

71.429

67.742

0.484
  prx Streptococcus pyogenes MGAS315

65.854

66.129

0.435
  prx Streptococcus pyogenes MGAS315

65.854

66.129

0.435