Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   E3C75_RS02290 Genome accession   NZ_CP038020
Coordinates   423958..424146 (+) Length   62 a.a.
NCBI ID   WP_111679075.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 418958..429146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS02245 - 418983..419276 (+) 294 WP_111679067.1 hypothetical protein -
  E3C75_RS02250 - 419280..419474 (+) 195 WP_024704077.1 hypothetical protein -
  E3C75_RS02255 - 419488..419724 (+) 237 WP_024704076.1 hypothetical protein -
  E3C75_RS11440 - 419711..419923 (+) 213 WP_240899459.1 hypothetical protein -
  E3C75_RS02265 - 420060..420332 (+) 273 WP_023909303.1 MerR family transcriptional regulator -
  E3C75_RS02270 - 420347..421207 (+) 861 WP_111679069.1 primase alpha helix C-terminal domain-containing protein -
  E3C75_RS02275 - 421197..422702 (+) 1506 WP_111679071.1 DNA primase family protein -
  E3C75_RS02280 - 422999..423184 (+) 186 WP_111679073.1 hypothetical protein -
  E3C75_RS02285 - 423250..423477 (+) 228 WP_223899748.1 hypothetical protein -
  E3C75_RS02290 prx 423958..424146 (+) 189 WP_111679075.1 hypothetical protein Regulator
  E3C75_RS02295 - 424527..425216 (+) 690 WP_197709066.1 DUF3800 domain-containing protein -
  E3C75_RS02300 argR 425686..426114 (+) 429 WP_024704313.1 arginine repressor -
  E3C75_RS02305 - 426114..426473 (+) 360 WP_064355739.1 YlbF family regulator -
  E3C75_RS02310 hexA 426466..429024 (+) 2559 WP_111679079.1 DNA mismatch repair protein MutS Machinery gene

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7133.08 Da        Isoelectric Point: 4.5837

>NTDB_id=309199 E3C75_RS02290 WP_111679075.1 423958..424146(+) (prx) [Streptococcus thermophilus strain ATCC 19258]
MLTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILRLEKVSDIIKELGGDN

Nucleotide


Download         Length: 189 bp        

>NTDB_id=309199 E3C75_RS02290 WP_111679075.1 423958..424146(+) (prx) [Streptococcus thermophilus strain ATCC 19258]
ATGCTAACCTATGATGAATTTAAAGAGGCAATGGACAATGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAA
TGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACGAAATATTGAGATTAGAAAAAGTATCGGATA
TAATAAAAGAACTAGGCGGAGACAACTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

60.345

93.548

0.565

  prx Streptococcus pyogenes MGAS8232

59.322

95.161

0.565

  prx Streptococcus pyogenes MGAS315

57.627

95.161

0.548

  prx Streptococcus pyogenes MGAS315

56.897

93.548

0.532

  prx Streptococcus pyogenes MGAS315

74.419

69.355

0.516

  prx Streptococcus pyogenes MGAS315

65.957

75.806

0.5

  prx Streptococcus pyogenes MGAS315

65.957

75.806

0.5


Multiple sequence alignment