Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Machinery gene
Locus tag   DV166_RS06115 Genome accession   NZ_CP031334
Coordinates   1033350..1034582 (-) Length   410 a.a.
NCBI ID   WP_002216405.1    Uniprot ID   Q7DDR1
Organism   Neisseria meningitidis strain M22293     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1028350..1039582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV166_RS06075 - 1028881..1029327 (+) 447 WP_002220271.1 DUF441 domain-containing protein -
  DV166_RS06095 pilF 1029819..1031495 (+) 1677 WP_002231695.1 type IV-A pilus assembly ATPase PilB Machinery gene
  DV166_RS06100 - 1031580..1031789 (-) 210 WP_002226982.1 DNA gyrase inhibitor YacG -
  DV166_RS06105 coaE 1031782..1032414 (-) 633 WP_002226983.1 dephospho-CoA kinase -
  DV166_RS06110 pilD 1032416..1033276 (-) 861 WP_002226036.1 A24 family peptidase Machinery gene
  DV166_RS06115 pilG 1033350..1034582 (-) 1233 WP_002216405.1 type 4 pilus assembly protein PilG Machinery gene
  DV166_RS06125 pgi 1035092..1036735 (+) 1644 WP_115437013.1 glucose-6-phosphate isomerase -
  DV166_RS06130 - 1036705..1036935 (+) 231 WP_019742712.1 hypothetical protein -
  DV166_RS06135 dapD 1036945..1037766 (+) 822 WP_002224875.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  DV166_RS06140 fabI 1037921..1038706 (+) 786 WP_115437014.1 enoyl-ACP reductase FabI -

Sequence


Protein


Download         Length: 410 a.a.        Molecular weight: 45273.29 Da        Isoelectric Point: 9.9273

>NTDB_id=305978 DV166_RS06115 WP_002216405.1 1033350..1034582(-) (pilG) [Neisseria meningitidis strain M22293]
MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVA

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=305978 DV166_RS06115 WP_002216405.1 1033350..1034582(-) (pilG) [Neisseria meningitidis strain M22293]
ATGGCTAAAAACGGAGGATTTTCTTTGTTCGCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCGT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTGTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAACCACCCAAAATATTTCG
ACCGCTTCTACTGCAATCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCACTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGCACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGCAACGTGGTCGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q7DDR1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

99.268

100

0.993

  pilG Neisseria meningitidis 44/76-A

98.537

100

0.985

  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461

  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444

  pilC Pseudomonas stutzeri DSM 10701

44.913

98.293

0.441

  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434

  pilC Vibrio cholerae strain A1552

41.045

98.049

0.402

  pilC Vibrio campbellii strain DS40M4

39.163

99.024

0.388


Multiple sequence alignment