Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Machinery gene
Locus tag   DV155_RS08455 Genome accession   NZ_CP031326
Coordinates   1427859..1429091 (-) Length   410 a.a.
NCBI ID   WP_002220278.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M21374     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1422859..1434091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV155_RS08415 - 1423390..1423836 (+) 447 WP_002220271.1 DUF441 domain-containing protein -
  DV155_RS08435 pilF 1424328..1426004 (+) 1677 WP_002220273.1 type IV-A pilus assembly ATPase PilB Machinery gene
  DV155_RS08440 - 1426089..1426298 (-) 210 WP_002212333.1 DNA gyrase inhibitor YacG -
  DV155_RS08445 coaE 1426291..1426923 (-) 633 WP_002220275.1 dephospho-CoA kinase -
  DV155_RS08450 pilD 1426925..1427785 (-) 861 WP_002220276.1 A24 family peptidase Machinery gene
  DV155_RS08455 pilG 1427859..1429091 (-) 1233 WP_002220278.1 type 4 pilus assembly protein PilG Machinery gene
  DV155_RS08465 pgi 1429601..1431244 (+) 1644 WP_002220279.1 glucose-6-phosphate isomerase -
  DV155_RS08470 - 1431214..1431444 (+) 231 WP_025458514.1 hypothetical protein -
  DV155_RS08475 dapD 1431454..1432275 (+) 822 WP_002220281.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  DV155_RS08480 fabI 1432430..1433215 (+) 786 WP_002212340.1 enoyl-ACP reductase FabI -

Sequence


Protein


Download         Length: 410 a.a.        Molecular weight: 45255.27 Da        Isoelectric Point: 9.9273

>NTDB_id=305705 DV155_RS08455 WP_002220278.1 1427859..1429091(-) (pilG) [Neisseria meningitidis strain M21374]
MAKNGGLSLFSKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVA

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=305705 DV155_RS08455 WP_002220278.1 1427859..1429091(-) (pilG) [Neisseria meningitidis strain M21374]
ATGGCTAAAAACGGAGGACTTTCTTTATTTTCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCGT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTGTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAATCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCGCTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGCACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGCAACGTGGTCGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

98.78

100

0.988

  pilG Neisseria meningitidis 44/76-A

98.049

100

0.98

  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461

  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444

  pilC Pseudomonas stutzeri DSM 10701

44.888

97.805

0.439

  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434

  pilC Vibrio cholerae strain A1552

41.045

98.049

0.402

  pilC Vibrio campbellii strain DS40M4

39.303

98.049

0.385


Multiple sequence alignment