Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | DV130_RS12850 | Genome accession | NZ_CP031248 |
| Coordinates | 981677..982264 (+) | Length | 195 a.a. |
| NCBI ID | WP_050088117.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain M26365 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 976677..987264
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV130_RS05090 | - | 976952..977071 (-) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| DV130_RS05095 | cipB | 977175..977324 (-) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| DV130_RS05105 | blpN | 977568..977771 (-) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| DV130_RS05110 | blpM | 977787..978041 (-) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| DV130_RS05115 | - | 978191..978976 (-) | 786 | Protein_994 | IS5 family transposase | - |
| DV130_RS05120 | - | 979179..979583 (-) | 405 | WP_000846943.1 | hypothetical protein | - |
| DV130_RS12180 | - | 979580..979744 (-) | 165 | WP_000727118.1 | hypothetical protein | - |
| DV130_RS05130 | - | 980041..980160 (-) | 120 | WP_000346298.1 | PncF family bacteriocin immunity protein | - |
| DV130_RS05135 | blpU | 980163..980393 (-) | 231 | WP_000379967.1 | bacteriocin-like peptide BlpU | - |
| DV130_RS05140 | blpJ | 980462..980731 (-) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| DV130_RS05150 | blpI | 981198..981395 (-) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| DV130_RS12850 | comA/nlmT | 981677..982264 (+) | 588 | WP_050088117.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| DV130_RS12855 | comA/nlmT | 982209..982934 (+) | 726 | WP_306341168.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| DV130_RS12860 | comA/nlmT | 982924..983823 (+) | 900 | WP_050072943.1 | ATP-binding cassette domain-containing protein | Regulator |
| DV130_RS05165 | - | 983834..985156 (+) | 1323 | WP_306341167.1 | bacteriocin secretion accessory protein | - |
| DV130_RS05170 | - | 985222..986568 (+) | 1347 | WP_050072287.1 | IS1380-like element ISSpn5 family transposase | - |
| DV130_RS05175 | - | 986762..986902 (+) | 141 | Protein_1006 | bacteriocin ABC transporter ATP-binding protein | - |
| DV130_RS05180 | blpC | 986959..987114 (+) | 156 | WP_061450964.1 | quorum-sensing system pheromone BlpC | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 22214.60 Da Isoelectric Point: 9.6188
>NTDB_id=304893 DV130_RS12850 WP_050088117.1 981677..982264(+) (comA/nlmT) [Streptococcus pneumoniae strain M26365]
MTSYKRTFVPQVDARDCGGAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
MTSYKRTFVPQVDARDCGGAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
Nucleotide
Download Length: 588 bp
>NTDB_id=304893 DV130_RS12850 WP_050088117.1 981677..982264(+) (comA/nlmT) [Streptococcus pneumoniae strain M26365]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAGTAGATGCGAGAGACTGTGGTGGCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
ATGACTTCTTATAAACGTACATTTGTTCCTCAAGTAGATGCGAGAGACTGTGGTGGCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
59.341 |
93.333 |
0.554 |
| comA | Streptococcus mitis NCTC 12261 |
54.891 |
94.359 |
0.518 |
| comA | Streptococcus mitis SK321 |
54.348 |
94.359 |
0.513 |
| comA | Streptococcus pneumoniae Rx1 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae D39 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae R6 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae TIGR4 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
52.717 |
94.359 |
0.497 |