Detailed information NTG0304698

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EW647_RS24235
• Genome accession: NZ_CP035767
• Coordinates: 4805247..4806272 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O145 strain RM12522-C8
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4800247..4811272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EW647_RS24210 (EW647_24885)	rraA	4800661..4801146 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EW647_RS24215 (EW647_24890)	menA	4801239..4802165 (-)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EW647_RS24220 (EW647_24895)	hslU	4802232..4803563 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EW647_RS24225 (EW647_24900)	hslV	4803573..4804103 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EW647_RS24230 (EW647_24905)	ftsN	4804196..4805155 (-)	960	WP_000068838.1	cell division protein FtsN	-
EW647_RS24235 (EW647_24910)	cytR	4805247..4806272 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EW647_RS24240 (EW647_24915)	priA	4806428..4808626 (-)	2199	WP_022581862.1	primosomal protein N'	Machinery gene
EW647_RS24245 (EW647_24920)	rpmE	4808829..4809041 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
EW647_RS24250 (EW647_24925)	yiiX	4809102..4809710 (-)	609	WP_000702305.1	YiiX family permuted papain-like enzyme	-
EW647_RS24255 (EW647_24930)	metJ	4809770..4810087 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=304698 EW647_RS24235 WP_000644904.1 4805247..4806272(-) (cytR) [Escherichia coli O145 strain RM12522-C8]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=304698 EW647_RS24235 WP_000644904.1 4805247..4806272(-) (cytR) [Escherichia coli O145 strain RM12522-C8]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCTCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGCCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628