Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT47_RS06795 Genome accession   NZ_CP035452
Coordinates   1359039..1360073 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm123     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1354039..1365073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT47_RS06760 (ETT47_06750) - 1354815..1355117 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT47_RS06765 (ETT47_06755) - 1355110..1355406 (-) 297 WP_002983486.1 YlxR family protein -
  ETT47_RS06770 (ETT47_06760) nusA 1355422..1356579 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT47_RS06775 (ETT47_06765) rimP 1356754..1357290 (-) 537 WP_172450027.1 ribosome maturation factor RimP -
  ETT47_RS06785 (ETT47_06775) trmB 1357549..1358184 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT47_RS06790 (ETT47_06780) ccrZ 1358184..1358975 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT47_RS06795 (ETT47_06785) pptB 1359039..1360073 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  ETT47_RS06800 (ETT47_06790) pptA 1360076..1360801 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT47_RS06805 (ETT47_06795) - 1360873..1361292 (+) 420 WP_002983376.1 HIT family protein -
  ETT47_RS06810 (ETT47_06800) - 1361289..1361609 (+) 321 WP_136099180.1 chemotaxis protein -
  ETT47_RS06815 (ETT47_06805) - 1361756..1363030 (-) 1275 WP_136099181.1 LCP family protein -
  ETT47_RS06820 (ETT47_06810) - 1363039..1363563 (-) 525 WP_109991544.1 GNAT family N-acetyltransferase -
  ETT47_RS06825 (ETT47_06815) tsaE 1363538..1363999 (-) 462 WP_011184866.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=303291 ETT47_RS06795 WP_002994331.1 1359039..1360073(-) (pptB) [Streptococcus pyogenes strain emm123]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=303291 ETT47_RS06795 WP_002994331.1 1359039..1360073(-) (pptB) [Streptococcus pyogenes strain emm123]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTAAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAATC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment