Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | DUN60_RS02985 | Genome accession | NZ_CP031055 |
| Coordinates | 682210..682509 (+) | Length | 99 a.a. |
| NCBI ID | WP_054548192.1 | Uniprot ID | A0A2N7KSL0 |
| Organism | Vibrio splendidus strain Vibrio sp | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 677210..687509
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DUN60_RS02975 | - | 679590..679862 (+) | 273 | WP_004736083.1 | HU family DNA-binding protein | - |
| DUN60_RS02980 | ppiD | 680083..681948 (+) | 1866 | WP_114633131.1 | peptidylprolyl isomerase | - |
| DUN60_RS02985 | comEA | 682210..682509 (+) | 300 | WP_054548192.1 | ComEA family DNA-binding protein | Machinery gene |
| DUN60_RS02990 | rrtA | 682500..683048 (-) | 549 | WP_065682117.1 | rhombosortase | - |
| DUN60_RS02995 | - | 683058..683657 (+) | 600 | WP_114633132.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| DUN60_RS03000 | - | 683684..685027 (-) | 1344 | WP_114633133.1 | anti-phage deoxyguanosine triphosphatase | - |
| DUN60_RS03005 | yfbR | 685082..685666 (-) | 585 | WP_017060613.1 | 5'-deoxynucleotidase | - |
| DUN60_RS03010 | - | 685998..687230 (-) | 1233 | WP_114633134.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10727.11 Da Isoelectric Point: 4.2092
>NTDB_id=302949 DUN60_RS02985 WP_054548192.1 682210..682509(+) (comEA) [Vibrio splendidus strain Vibrio sp]
MRTIYSTLLLSFLMALSSPAFSDSPSKAELYDGIEITVNINTATAEELSALLVGVGDKKAQEIVDYRDQNGAFTTADDLV
SVKGIGEATVEKNRERIQL
MRTIYSTLLLSFLMALSSPAFSDSPSKAELYDGIEITVNINTATAEELSALLVGVGDKKAQEIVDYRDQNGAFTTADDLV
SVKGIGEATVEKNRERIQL
Nucleotide
Download Length: 300 bp
>NTDB_id=302949 DUN60_RS02985 WP_054548192.1 682210..682509(+) (comEA) [Vibrio splendidus strain Vibrio sp]
ATGCGCACGATATATTCAACACTACTTCTTTCATTTCTGATGGCTCTGAGCTCCCCAGCGTTTTCTGATAGCCCATCTAA
AGCTGAGCTTTACGATGGCATCGAGATTACGGTAAACATCAATACTGCGACGGCAGAAGAACTCTCAGCGCTATTAGTTG
GTGTTGGGGACAAGAAAGCCCAAGAAATCGTCGATTACAGAGATCAAAACGGTGCGTTTACGACTGCTGATGATTTGGTG
AGTGTGAAAGGGATAGGTGAAGCTACGGTTGAAAAGAACCGCGAAAGAATTCAACTTTGA
ATGCGCACGATATATTCAACACTACTTCTTTCATTTCTGATGGCTCTGAGCTCCCCAGCGTTTTCTGATAGCCCATCTAA
AGCTGAGCTTTACGATGGCATCGAGATTACGGTAAACATCAATACTGCGACGGCAGAAGAACTCTCAGCGCTATTAGTTG
GTGTTGGGGACAAGAAAGCCCAAGAAATCGTCGATTACAGAGATCAAAACGGTGCGTTTACGACTGCTGATGATTTGGTG
AGTGTGAAAGGGATAGGTGAAGCTACGGTTGAAAAGAACCGCGAAAGAATTCAACTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
54.902 |
100 |
0.566 |
| comEA | Vibrio cholerae strain A1552 |
54.902 |
100 |
0.566 |
| comEA | Vibrio campbellii strain DS40M4 |
54.348 |
92.929 |
0.505 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
54.945 |
91.919 |
0.505 |
| comEA | Acinetobacter baylyi ADP1 |
52.439 |
82.828 |
0.434 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
36.937 |
100 |
0.414 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
60 |
60.606 |
0.364 |
| comEA | Legionella pneumophila str. Paris |
35.294 |
100 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
35.294 |
100 |
0.364 |